SILENT_MODE BLOCK_FILE jp_dZJLDEZ.concise.blc MAX_NSEQ 565 MAX_INPUT_LEN 567 OUTPUT_FILE jp_dZJLDEZ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 315 554 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 555 315 564 H SPACE SUB_CHARS 1 555 315 564 E SPACE SUB_CHARS 1 555 315 564 - SPACE STRAND 6 558 8 COLOUR_TEXT_REGION 6 558 8 558 51 STRAND 195 558 197 COLOUR_TEXT_REGION 195 558 197 558 51 STRAND 266 558 272 COLOUR_TEXT_REGION 266 558 272 558 51 HELIX 15 558 26 COLOUR_TEXT_REGION 15 558 26 558 50 HELIX 33 558 40 COLOUR_TEXT_REGION 33 558 40 558 50 HELIX 45 558 59 COLOUR_TEXT_REGION 45 558 59 558 50 HELIX 61 558 71 COLOUR_TEXT_REGION 61 558 71 558 50 HELIX 75 558 82 COLOUR_TEXT_REGION 75 558 82 558 50 HELIX 87 558 98 COLOUR_TEXT_REGION 87 558 98 558 50 HELIX 105 558 112 COLOUR_TEXT_REGION 105 558 112 558 50 HELIX 117 558 131 COLOUR_TEXT_REGION 117 558 131 558 50 HELIX 135 558 140 COLOUR_TEXT_REGION 135 558 140 558 50 HELIX 146 558 156 COLOUR_TEXT_REGION 146 558 156 558 50 HELIX 169 558 182 COLOUR_TEXT_REGION 169 558 182 558 50 HELIX 189 558 194 COLOUR_TEXT_REGION 189 558 194 558 50 HELIX 201 558 214 COLOUR_TEXT_REGION 201 558 214 558 50 HELIX 219 558 225 COLOUR_TEXT_REGION 219 558 225 558 50 HELIX 230 558 241 COLOUR_TEXT_REGION 230 558 241 558 50 HELIX 246 558 257 COLOUR_TEXT_REGION 246 558 257 558 50 HELIX 265 558 265 COLOUR_TEXT_REGION 265 558 265 558 50 HELIX 276 558 289 COLOUR_TEXT_REGION 276 558 289 558 50 HELIX 294 558 301 COLOUR_TEXT_REGION 294 558 301 558 50 HELIX 304 558 312 COLOUR_TEXT_REGION 304 558 312 558 50 STRAND 6 563 8 COLOUR_TEXT_REGION 6 563 8 563 51 STRAND 195 563 196 COLOUR_TEXT_REGION 195 563 196 563 51 STRAND 267 563 272 COLOUR_TEXT_REGION 267 563 272 563 51 HELIX 15 563 26 COLOUR_TEXT_REGION 15 563 26 563 50 HELIX 33 563 41 COLOUR_TEXT_REGION 33 563 41 563 50 HELIX 45 563 59 COLOUR_TEXT_REGION 45 563 59 563 50 HELIX 61 563 61 COLOUR_TEXT_REGION 61 563 61 563 50 HELIX 63 563 70 COLOUR_TEXT_REGION 63 563 70 563 50 HELIX 75 563 82 COLOUR_TEXT_REGION 75 563 82 563 50 HELIX 87 563 98 COLOUR_TEXT_REGION 87 563 98 563 50 HELIX 105 563 113 COLOUR_TEXT_REGION 105 563 113 563 50 HELIX 117 563 131 COLOUR_TEXT_REGION 117 563 131 563 50 HELIX 135 563 140 COLOUR_TEXT_REGION 135 563 140 563 50 HELIX 146 563 155 COLOUR_TEXT_REGION 146 563 155 563 50 HELIX 167 563 182 COLOUR_TEXT_REGION 167 563 182 563 50 HELIX 189 563 194 COLOUR_TEXT_REGION 189 563 194 563 50 HELIX 201 563 215 COLOUR_TEXT_REGION 201 563 215 563 50 HELIX 219 563 225 COLOUR_TEXT_REGION 219 563 225 563 50 HELIX 229 563 241 COLOUR_TEXT_REGION 229 563 241 563 50 HELIX 245 563 257 COLOUR_TEXT_REGION 245 563 257 563 50 HELIX 264 563 266 COLOUR_TEXT_REGION 264 563 266 563 50 HELIX 276 563 289 COLOUR_TEXT_REGION 276 563 289 563 50 HELIX 294 563 300 COLOUR_TEXT_REGION 294 563 300 563 50 HELIX 304 563 312 COLOUR_TEXT_REGION 304 563 312 563 50 STRAND 36 564 40 COLOUR_TEXT_REGION 36 564 40 564 51 STRAND 106 564 113 COLOUR_TEXT_REGION 106 564 113 564 51 STRAND 193 564 197 COLOUR_TEXT_REGION 193 564 197 564 51 STRAND 266 564 272 COLOUR_TEXT_REGION 266 564 272 564 51 HELIX 16 564 27 COLOUR_TEXT_REGION 16 564 27 564 50 HELIX 34 564 35 COLOUR_TEXT_REGION 34 564 35 564 50 HELIX 45 564 59 COLOUR_TEXT_REGION 45 564 59 564 50 HELIX 61 564 71 COLOUR_TEXT_REGION 61 564 71 564 50 HELIX 75 564 82 COLOUR_TEXT_REGION 75 564 82 564 50 HELIX 87 564 98 COLOUR_TEXT_REGION 87 564 98 564 50 HELIX 117 564 131 COLOUR_TEXT_REGION 117 564 131 564 50 HELIX 135 564 141 COLOUR_TEXT_REGION 135 564 141 564 50 HELIX 147 564 157 COLOUR_TEXT_REGION 147 564 157 564 50 HELIX 171 564 181 COLOUR_TEXT_REGION 171 564 181 564 50 HELIX 190 564 192 COLOUR_TEXT_REGION 190 564 192 564 50 HELIX 201 564 213 COLOUR_TEXT_REGION 201 564 213 564 50 HELIX 219 564 226 COLOUR_TEXT_REGION 219 564 226 564 50 HELIX 230 564 241 COLOUR_TEXT_REGION 230 564 241 564 50 HELIX 246 564 257 COLOUR_TEXT_REGION 246 564 257 564 50 HELIX 276 564 289 COLOUR_TEXT_REGION 276 564 289 564 50 HELIX 294 564 312 COLOUR_TEXT_REGION 294 564 312 564 50