SILENT_MODE BLOCK_FILE jp_nxfQ3UQ.concise.blc MAX_NSEQ 765 MAX_INPUT_LEN 767 OUTPUT_FILE jp_nxfQ3UQ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 259 754 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 755 259 764 H SPACE SUB_CHARS 1 755 259 764 E SPACE SUB_CHARS 1 755 259 764 - SPACE HELIX 14 758 34 COLOUR_TEXT_REGION 14 758 34 758 50 HELIX 38 758 61 COLOUR_TEXT_REGION 38 758 61 758 50 HELIX 75 758 104 COLOUR_TEXT_REGION 75 758 104 758 50 HELIX 127 758 152 COLOUR_TEXT_REGION 127 758 152 758 50 HELIX 154 758 182 COLOUR_TEXT_REGION 154 758 182 758 50 HELIX 190 758 221 COLOUR_TEXT_REGION 190 758 221 758 50 HELIX 231 758 256 COLOUR_TEXT_REGION 231 758 256 758 50 STRAND 6 763 7 COLOUR_TEXT_REGION 6 763 7 763 51 HELIX 14 763 34 COLOUR_TEXT_REGION 14 763 34 763 50 HELIX 38 763 61 COLOUR_TEXT_REGION 38 763 61 763 50 HELIX 71 763 103 COLOUR_TEXT_REGION 71 763 103 763 50 HELIX 127 763 151 COLOUR_TEXT_REGION 127 763 151 763 50 HELIX 154 763 181 COLOUR_TEXT_REGION 154 763 181 763 50 HELIX 190 763 221 COLOUR_TEXT_REGION 190 763 221 763 50 HELIX 231 763 257 COLOUR_TEXT_REGION 231 763 257 763 50 STRAND 194 764 197 COLOUR_TEXT_REGION 194 764 197 764 51 STRAND 247 764 256 COLOUR_TEXT_REGION 247 764 256 764 51 HELIX 14 764 34 COLOUR_TEXT_REGION 14 764 34 764 50 HELIX 38 764 61 COLOUR_TEXT_REGION 38 764 61 764 50 HELIX 79 764 104 COLOUR_TEXT_REGION 79 764 104 764 50 HELIX 128 764 183 COLOUR_TEXT_REGION 128 764 183 764 50 HELIX 198 764 222 COLOUR_TEXT_REGION 198 764 222 764 50 HELIX 231 764 246 COLOUR_TEXT_REGION 231 764 246 764 50