QUERY : HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK : QUERY
UniRef90_UPI0002655FAB : HYEEDPGKNVPFTVENKRRLLAMMCLYFGSGFAAPFFIVRHQLL-- : UniRef90_UPI0002655FAB
UniRef90_UPI00027F9D85 : HCEEGPGKNLPFSLKNKWWLPALMCLYFGSGFAAPFFIVRHQMLKK : UniRef90_UPI00027F9D85
UniRef90_UPI00032918FE : HCEECSGTNLPFPVENKWRLLIMMTLYFGSRFTAPFFIVRHQLLKK : UniRef90_UPI00032918FE
UniRef90_UPI00033384A1 : HYELGPGKSLPFSMENKWWVLDMMTLYFGSGFAAPFLIVRHQLLKK : UniRef90_UPI00033384A1
UniRef90_UPI000332F79B : HYEEGPRKTLSFSVENKRRLLAMMAVFFGSEFAATFFIVRHQLLKK : UniRef90_UPI000332F79B
UniRef90_UPI0003D07540 : HHEEGLGKNLPFSVENTWRLLALMTVYFGSGFAAPFFTVRHPLLKK : UniRef90_UPI0003D07540
UniRef90_F7CKW1 : HYEEGPGKNLPFSVENKRWLLAKMCLYFGSAFATPFLIARHQLLK- : UniRef90_F7CKW1
UniRef90_UPI000298FB1D : HSEEGPGENLPFSVENKWWLLNMMTVYFGSGFTAPLFIVRHRLLEK : UniRef90_UPI000298FB1D
UniRef90_K7GAS9 : HYEDGPGKNIPFSVENKWRLLGLMAVFFRSGFTLPFIVVRHQLLKK : UniRef90_K7GAS9
UniRef90_UPI0003337280 : HNEEGPGKNLPFSVENKWRFRVLMAAFFGSGFAAPFFIVRHQPLKK : UniRef90_UPI0003337280
UniRef90_UPI0003332B12 : HYEKGPGKTLPFSVESTWRLLTMMAVYVGPGFAAPFFI-RHQLLKK : UniRef90_UPI0003332B12
UniRef90_E3TDC2 : HYAEGPGQNLPFSVENKWKLLGMMVLFFDSGFTFPFIIVRHQILKK : UniRef90_E3TDC2
UniRef90_UPI0001CE0884 : -CEEGSGRNLPFSVEKQWRLPVMMTLHLGSAFAAPFFLVPHHLLKK : UniRef90_UPI0001CE0884
UniRef90_UPI0002C5855B : HWEEGLGKNLSFSAENKCQLLIMTTVYFGSGFAAHFFIVRHQLLKK : UniRef90_UPI0002C5855B
UniRef90_UPI000441D2CC : HYEDGPGTNLPFSVNNKWKLLFGTFIFTITGIGGPCFIVRHQLLKQ : UniRef90_UPI000441D2CC
UniRef90_UPI0003C90BC7 : HYEEGPGKNLPFSVENKWRVMP------GSGFAAPFSIVRHQLLKK : UniRef90_UPI0003C90BC7
UniRef90_UPI0001D543EB : YYAEGPGKNLPFSMKNTCRLLTMMTLYLGSGSVATFFRVKHQLLK- : UniRef90_UPI0001D543EB
UniRef90_UPI0001CE2B2E : YDKETSEKNSLFLVENKQRLLVMKTLYFGSGFAAPFFIVQHQLPKK : UniRef90_UPI0001CE2B2E
UniRef90_C9W1M9 : HDTSGPGANLPFNINNKFGLTIKFALFFGSGFAVPFFAVRHQLLE- : UniRef90_C9W1M9
UniRef90_D2HGM1 : HYEEGPGKNLPFSGENMWRLLIMMTVYFGSGFVVPF---------- : UniRef90_D2HGM1
UniRef90_H9JJJ9 : -----PGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRKN : UniRef90_H9JJJ9
UniRef90_Q6B866 : HHDEGPGSNLPFKINNRFGLTIKFALFFGTGFGLPFFAVRHQLLKQ : UniRef90_Q6B866
UniRef90_H9JJK0 : -----PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK : UniRef90_H9JJK0
UniRef90_UPI00026571E8 : ------GSNLPFNMENPWTLAIKMSLFFGSGFVIPFLTVRHQLL-- : UniRef90_UPI00026571E8
UniRef90_UPI00022C911A : HGPEGPGANLPFSINNRYKLCAIFMAFFGSGFSVPFLVLRYHLTK- : UniRef90_UPI00022C911A
UniRef90_M7NKF0 : HVEDGPRKNLPFKITSKGRMATKILLFFGFGFSIPFVSCYWQL--- : UniRef90_M7NKF0
UniRef90_W6UV86 : ------GANLPFSIENPRRLAIKFILFIGIAFNIPFFVTYYQM--- : UniRef90_W6UV86
UniRef90_J9KWH2 : HAYEGPGHNLPFDVFSKYKFTFYTAVFFSTGFGLPFLMVRY----- : UniRef90_J9KWH2
UniRef90_D2H3V4 : HYEEVSGKNLLFSVENEWQLLI-MTVYFGSRFAALF---------- : UniRef90_D2H3V4
UniRef90_UPI000273F4A5 : HCEEGPEKNLPFSVENKWQLLAMMTLYFGPGFATLFFIVRHQLLKK : UniRef90_UPI000273F4A5
UniRef90_B8JJB0 : ----------------------MMTVYFGSGFAAPFFIVRHQLLKK : UniRef90_B8JJB0
UniRef90_Q6IV91 : HVDEGPGNNLPFSVANKWRLLGTMTLFFGSGFAAPFLVVRHQLLKK : UniRef90_Q6IV91
UniRef90_P80334 : HYSEGPGQNLPFSVQNKXRLLGMM---------------------- : UniRef90_P80334
UniRef90_S2KC08 : HFSNSNGQNVPFNTKNRVGLAIKMTLYLGLGFGAPFL--------- : UniRef90_S2KC08
UniRef90_UPI0003C2686B : HYEMRPAANLPFSVENKWRLLAVMSVFLGSGFLAPFLIVRHQLLKK : UniRef90_UPI0003C2686B
UniRef90_UPI00034F32E1 : HYKEDPGKNLPLSVENEWRLLVMMTLYFGSGFAVLFFIVRYQLLKK : UniRef90_UPI00034F32E1
UniRef90_M5BJ82 : HFENTLNNNTPFSYQNKAAFAFKVTAFLGTGFAIPFIATFYQVSK- : UniRef90_M5BJ82
: 1---------11--------21--------31--------41---- :
OrigSeq : HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK : OrigSeq
Jnet : ----------------HHHHHHHHHHHHHHH----HEEEEEEH--- : Jnet
jhmm : ----------------HHHHHHHHHHHHHHH----HEEEEEEE--- : jhmm
jpssm : ----------------HHHHHHHHHHHHHHHH---HEEHHHHH--- : jpssm
Lupas 14 : ---------------------------------------------- : Lupas 14
Lupas 21 : ---------------------------------------------- : Lupas 21
Lupas 28 : ---------------------------------------------- : Lupas 28
Jnet_25 : --------BBBB-B-B-B-BBBBBBBBBB--B-BBBBBBBBBB--- : Jnet_25
Jnet_5 : ---------B---------B--------------B-BBB------- : Jnet_5
Jnet_0 : ---------------------------------------------- : Jnet_0
Jnet Rel : 8988777776512675467889999987420101011133210189 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.