SILENT_MODE BLOCK_FILE jp_4x1muai.concise.blc MAX_NSEQ 524 MAX_INPUT_LEN 526 OUTPUT_FILE jp_4x1muai.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 352 513 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 514 352 523 H SPACE SUB_CHARS 1 514 352 523 E SPACE SUB_CHARS 1 514 352 523 - SPACE STRAND 6 517 15 COLOUR_TEXT_REGION 6 517 15 517 51 STRAND 30 517 32 COLOUR_TEXT_REGION 30 517 32 517 51 STRAND 40 517 45 COLOUR_TEXT_REGION 40 517 45 517 51 STRAND 51 517 54 COLOUR_TEXT_REGION 51 517 54 517 51 STRAND 59 517 64 COLOUR_TEXT_REGION 59 517 64 517 51 STRAND 72 517 76 COLOUR_TEXT_REGION 72 517 76 517 51 STRAND 85 517 92 COLOUR_TEXT_REGION 85 517 92 517 51 STRAND 99 517 105 COLOUR_TEXT_REGION 99 517 105 517 51 STRAND 112 517 114 COLOUR_TEXT_REGION 112 517 114 517 51 STRAND 129 517 136 COLOUR_TEXT_REGION 129 517 136 517 51 STRAND 142 517 149 COLOUR_TEXT_REGION 142 517 149 517 51 STRAND 153 517 161 COLOUR_TEXT_REGION 153 517 161 517 51 STRAND 167 517 175 COLOUR_TEXT_REGION 167 517 175 517 51 STRAND 182 517 187 COLOUR_TEXT_REGION 182 517 187 517 51 STRAND 192 517 197 COLOUR_TEXT_REGION 192 517 197 517 51 STRAND 201 517 206 COLOUR_TEXT_REGION 201 517 206 517 51 STRAND 216 517 220 COLOUR_TEXT_REGION 216 517 220 517 51 STRAND 232 517 237 COLOUR_TEXT_REGION 232 517 237 517 51 STRAND 243 517 249 COLOUR_TEXT_REGION 243 517 249 517 51 STRAND 254 517 260 COLOUR_TEXT_REGION 254 517 260 517 51 STRAND 267 517 273 COLOUR_TEXT_REGION 267 517 273 517 51 STRAND 287 517 291 COLOUR_TEXT_REGION 287 517 291 517 51 STRAND 301 517 306 COLOUR_TEXT_REGION 301 517 306 517 51 STRAND 321 517 324 COLOUR_TEXT_REGION 321 517 324 517 51 HELIX 326 517 332 COLOUR_TEXT_REGION 326 517 332 517 50 STRAND 6 522 15 COLOUR_TEXT_REGION 6 522 15 522 51 STRAND 30 522 32 COLOUR_TEXT_REGION 30 522 32 522 51 STRAND 41 522 45 COLOUR_TEXT_REGION 41 522 45 522 51 STRAND 51 522 54 COLOUR_TEXT_REGION 51 522 54 522 51 STRAND 60 522 63 COLOUR_TEXT_REGION 60 522 63 522 51 STRAND 72 522 75 COLOUR_TEXT_REGION 72 522 75 522 51 STRAND 85 522 92 COLOUR_TEXT_REGION 85 522 92 522 51 STRAND 99 522 105 COLOUR_TEXT_REGION 99 522 105 522 51 STRAND 112 522 114 COLOUR_TEXT_REGION 112 522 114 522 51 STRAND 129 522 136 COLOUR_TEXT_REGION 129 522 136 522 51 STRAND 142 522 149 COLOUR_TEXT_REGION 142 522 149 522 51 STRAND 153 522 161 COLOUR_TEXT_REGION 153 522 161 522 51 STRAND 167 522 174 COLOUR_TEXT_REGION 167 522 174 522 51 STRAND 182 522 187 COLOUR_TEXT_REGION 182 522 187 522 51 STRAND 192 522 197 COLOUR_TEXT_REGION 192 522 197 522 51 STRAND 201 522 206 COLOUR_TEXT_REGION 201 522 206 522 51 STRAND 216 522 220 COLOUR_TEXT_REGION 216 522 220 522 51 STRAND 231 522 237 COLOUR_TEXT_REGION 231 522 237 522 51 STRAND 243 522 249 COLOUR_TEXT_REGION 243 522 249 522 51 STRAND 254 522 260 COLOUR_TEXT_REGION 254 522 260 522 51 STRAND 266 522 272 COLOUR_TEXT_REGION 266 522 272 522 51 STRAND 287 522 291 COLOUR_TEXT_REGION 287 522 291 522 51 STRAND 301 522 306 COLOUR_TEXT_REGION 301 522 306 522 51 STRAND 322 522 324 COLOUR_TEXT_REGION 322 522 324 522 51 HELIX 326 522 332 COLOUR_TEXT_REGION 326 522 332 522 50 STRAND 6 523 15 COLOUR_TEXT_REGION 6 523 15 523 51 STRAND 30 523 32 COLOUR_TEXT_REGION 30 523 32 523 51 STRAND 40 523 45 COLOUR_TEXT_REGION 40 523 45 523 51 STRAND 51 523 55 COLOUR_TEXT_REGION 51 523 55 523 51 STRAND 59 523 64 COLOUR_TEXT_REGION 59 523 64 523 51 STRAND 73 523 76 COLOUR_TEXT_REGION 73 523 76 523 51 STRAND 84 523 92 COLOUR_TEXT_REGION 84 523 92 523 51 STRAND 99 523 106 COLOUR_TEXT_REGION 99 523 106 523 51 STRAND 112 523 114 COLOUR_TEXT_REGION 112 523 114 523 51 STRAND 129 523 136 COLOUR_TEXT_REGION 129 523 136 523 51 STRAND 142 523 148 COLOUR_TEXT_REGION 142 523 148 523 51 STRAND 153 523 161 COLOUR_TEXT_REGION 153 523 161 523 51 STRAND 167 523 176 COLOUR_TEXT_REGION 167 523 176 523 51 STRAND 181 523 187 COLOUR_TEXT_REGION 181 523 187 523 51 STRAND 192 523 197 COLOUR_TEXT_REGION 192 523 197 523 51 STRAND 201 523 206 COLOUR_TEXT_REGION 201 523 206 523 51 STRAND 216 523 220 COLOUR_TEXT_REGION 216 523 220 523 51 STRAND 233 523 237 COLOUR_TEXT_REGION 233 523 237 523 51 STRAND 243 523 249 COLOUR_TEXT_REGION 243 523 249 523 51 STRAND 254 523 259 COLOUR_TEXT_REGION 254 523 259 523 51 STRAND 268 523 274 COLOUR_TEXT_REGION 268 523 274 523 51 STRAND 287 523 292 COLOUR_TEXT_REGION 287 523 292 523 51 STRAND 301 523 306 COLOUR_TEXT_REGION 301 523 306 523 51 STRAND 321 523 325 COLOUR_TEXT_REGION 321 523 325 523 51 HELIX 326 523 332 COLOUR_TEXT_REGION 326 523 332 523 50