SILENT_MODE BLOCK_FILE jp_3bTz0Pj.concise.blc MAX_NSEQ 873 MAX_INPUT_LEN 875 OUTPUT_FILE jp_3bTz0Pj.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 239 862 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 863 239 872 H SPACE SUB_CHARS 1 863 239 872 E SPACE SUB_CHARS 1 863 239 872 - SPACE STRAND 4 866 10 COLOUR_TEXT_REGION 4 866 10 866 51 STRAND 21 866 29 COLOUR_TEXT_REGION 21 866 29 866 51 STRAND 35 866 36 COLOUR_TEXT_REGION 35 866 36 866 51 STRAND 73 866 77 COLOUR_TEXT_REGION 73 866 77 866 51 STRAND 121 866 124 COLOUR_TEXT_REGION 121 866 124 866 51 STRAND 133 866 139 COLOUR_TEXT_REGION 133 866 139 866 51 STRAND 150 866 154 COLOUR_TEXT_REGION 150 866 154 866 51 STRAND 200 866 207 COLOUR_TEXT_REGION 200 866 207 866 51 STRAND 232 866 236 COLOUR_TEXT_REGION 232 866 236 866 51 HELIX 48 866 59 COLOUR_TEXT_REGION 48 866 59 866 50 HELIX 82 866 92 COLOUR_TEXT_REGION 82 866 92 866 50 HELIX 106 866 107 COLOUR_TEXT_REGION 106 866 107 866 50 HELIX 113 866 120 COLOUR_TEXT_REGION 113 866 120 866 50 HELIX 158 866 165 COLOUR_TEXT_REGION 158 866 165 866 50 HELIX 167 866 169 COLOUR_TEXT_REGION 167 866 169 866 50 HELIX 179 866 196 COLOUR_TEXT_REGION 179 866 196 866 50 HELIX 225 866 227 COLOUR_TEXT_REGION 225 866 227 866 50 STRAND 4 871 10 COLOUR_TEXT_REGION 4 871 10 871 51 STRAND 21 871 29 COLOUR_TEXT_REGION 21 871 29 871 51 STRAND 35 871 36 COLOUR_TEXT_REGION 35 871 36 871 51 STRAND 65 871 66 COLOUR_TEXT_REGION 65 871 66 871 51 STRAND 73 871 77 COLOUR_TEXT_REGION 73 871 77 871 51 STRAND 121 871 125 COLOUR_TEXT_REGION 121 871 125 871 51 STRAND 133 871 139 COLOUR_TEXT_REGION 133 871 139 871 51 STRAND 150 871 155 COLOUR_TEXT_REGION 150 871 155 871 51 STRAND 200 871 207 COLOUR_TEXT_REGION 200 871 207 871 51 STRAND 232 871 236 COLOUR_TEXT_REGION 232 871 236 871 51 HELIX 48 871 60 COLOUR_TEXT_REGION 48 871 60 871 50 HELIX 82 871 91 COLOUR_TEXT_REGION 82 871 91 871 50 HELIX 113 871 118 COLOUR_TEXT_REGION 113 871 118 871 50 HELIX 158 871 169 COLOUR_TEXT_REGION 158 871 169 871 50 HELIX 179 871 196 COLOUR_TEXT_REGION 179 871 196 871 50 HELIX 199 871 199 COLOUR_TEXT_REGION 199 871 199 871 50 HELIX 224 871 228 COLOUR_TEXT_REGION 224 871 228 871 50 STRAND 4 872 9 COLOUR_TEXT_REGION 4 872 9 872 51 STRAND 21 872 30 COLOUR_TEXT_REGION 21 872 30 872 51 STRAND 34 872 36 COLOUR_TEXT_REGION 34 872 36 872 51 STRAND 73 872 77 COLOUR_TEXT_REGION 73 872 77 872 51 STRAND 107 872 108 COLOUR_TEXT_REGION 107 872 108 872 51 STRAND 132 872 139 COLOUR_TEXT_REGION 132 872 139 872 51 STRAND 149 872 154 COLOUR_TEXT_REGION 149 872 154 872 51 STRAND 175 872 175 COLOUR_TEXT_REGION 175 872 175 872 51 STRAND 200 872 207 COLOUR_TEXT_REGION 200 872 207 872 51 STRAND 232 872 237 COLOUR_TEXT_REGION 232 872 237 872 51 HELIX 47 872 58 COLOUR_TEXT_REGION 47 872 58 872 50 HELIX 83 872 92 COLOUR_TEXT_REGION 83 872 92 872 50 HELIX 105 872 106 COLOUR_TEXT_REGION 105 872 106 872 50 HELIX 113 872 123 COLOUR_TEXT_REGION 113 872 123 872 50 HELIX 158 872 164 COLOUR_TEXT_REGION 158 872 164 872 50 HELIX 179 872 195 COLOUR_TEXT_REGION 179 872 195 872 50