Jpred secondary structure prediction results

QUERY           : METLKITVYIVVTFFVLLFVFGFLSGDPARNPKRKDLE : QUERY 
UniRef90_G7JR91 : MLTLKLFVYTIVIFFIYHFIFRFLSNDPGRNPGREE-- : UniRef90_G7JR91
UniRef90_O78471 : MFTLKIVVYTTVTFFVSLFTFGFLSNDASRNPNRKDLE : UniRef90_O78471
UniRef90_F4YZB0 : MLTLKLLVHTVVISPVSLPVPGSPPNDPGRNPGRK--- : UniRef90_F4YZB0
UniRef90_Q06J30 : MLILKSFVYTVVASFVSLFIFGFLSNDPGRRPGRKRI- : UniRef90_Q06J30

                : 1---------11--------21--------31------ :
OrigSeq         : METLKITVYIVVTFFVLLFVFGFLSGDPARNPKRKDLE : OrigSeq

Jnet            : --HHHHHHHHHHHHHHHHH------------------- : Jnet
jhmm            : -HHHHHHHHHHHHHHHHHH------------------- : jhmm
jpssm           : --HHHHHHHHHHHHHHHH-------------------- : jpssm

Lupas 14        : -------------------------------------- : Lupas 14
Lupas 21        : -------------------------------------- : Lupas 21
Lupas 28        : -------------------------------------- : Lupas 28

Jnet_25         : ---B---BBBBBBBBBBBBBBBBB------------B- : Jnet_25
Jnet_5          : -------------------------------------- : Jnet_5
Jnet_0          : -------------------------------------- : Jnet_0
Jnet Rel        : 92366899999999886325677777777777777889 : Jnet Rel


Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.