QUERY           : MEPNPNRQPVELNRTSLYLGLLLILVLALLFSSYFFN : QUERY 
UniRef90_Q5ENP4 : -DPRPNDAPVDLNRTSLYWGLLTICVLSVLFSSYFFN : UniRef90_Q5ENP4
UniRef90_D8KXH3 : -RPNPNKQSVESNRTSLYWGLPLIFVPAVLFSNHFFN : UniRef90_D8KXH3
UniRef90_D7KR14 : -QSNPNEQSVELNRTSLYWGLLLIFVLA--------- : UniRef90_D7KR14
UniRef90_Q2WGG8 : -QRNPNEQSVELNRTSLYWGPLLIPAPAVSFPNHSSN : UniRef90_Q2WGG8
UniRef90_Q05QY1 : ---NPNSLPVELNRTSLYLGILFVATCGILFSSYFFN : UniRef90_Q05QY1

                : 1---------11--------21--------31----- :
OrigSeq         : MEPNPNRQPVELNRTSLYLGLLLILVLALLFSSYFFN : OrigSeq

Jnet            : --------------HHHHHHHHHHHHH---------- : Jnet
jhmm            : ---------------HHHHHHHHHHHHHHH------- : jhmm
jpssm           : -------------HHHHHH-HHHHHHH---------- : jpssm

Lupas 14        : ------------------------------------- : Lupas 14
Lupas 21        : ------------------------------------- : Lupas 21
Lupas 28        : ------------------------------------- : Lupas 28

Jnet_25         : ---------B-B-BBBBBBBBB-BBBB-B-B--B--- : Jnet_25
Jnet_5          : ----------------B--B---B-BB---------- : Jnet_5
Jnet_0          : ------------------------------------- : Jnet_0
Jnet Rel        : 9988887764231026630314466630238788899 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.