SILENT_MODE BLOCK_FILE jp_IbOATLr.concise.blc MAX_NSEQ 537 MAX_INPUT_LEN 539 OUTPUT_FILE jp_IbOATLr.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 576 526 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 527 576 536 H SPACE SUB_CHARS 1 527 576 536 E SPACE SUB_CHARS 1 527 576 536 - SPACE STRAND 199 530 202 COLOUR_TEXT_REGION 199 530 202 530 51 STRAND 230 530 230 COLOUR_TEXT_REGION 230 530 230 530 51 STRAND 350 530 353 COLOUR_TEXT_REGION 350 530 353 530 51 STRAND 359 530 363 COLOUR_TEXT_REGION 359 530 363 530 51 STRAND 470 530 472 COLOUR_TEXT_REGION 470 530 472 530 51 STRAND 488 530 489 COLOUR_TEXT_REGION 488 530 489 530 51 STRAND 545 530 545 COLOUR_TEXT_REGION 545 530 545 530 51 HELIX 19 530 34 COLOUR_TEXT_REGION 19 530 34 530 50 HELIX 45 530 63 COLOUR_TEXT_REGION 45 530 63 530 50 HELIX 95 530 111 COLOUR_TEXT_REGION 95 530 111 530 50 HELIX 122 530 142 COLOUR_TEXT_REGION 122 530 142 530 50 HELIX 150 530 171 COLOUR_TEXT_REGION 150 530 171 530 50 HELIX 252 530 264 COLOUR_TEXT_REGION 252 530 264 530 50 HELIX 277 530 286 COLOUR_TEXT_REGION 277 530 286 530 50 HELIX 300 530 313 COLOUR_TEXT_REGION 300 530 313 530 50 HELIX 325 530 346 COLOUR_TEXT_REGION 325 530 346 530 50 HELIX 400 530 415 COLOUR_TEXT_REGION 400 530 415 530 50 HELIX 475 530 487 COLOUR_TEXT_REGION 475 530 487 530 50 HELIX 498 530 517 COLOUR_TEXT_REGION 498 530 517 530 50 HELIX 554 530 562 COLOUR_TEXT_REGION 554 530 562 530 50 STRAND 199 535 202 COLOUR_TEXT_REGION 199 535 202 535 51 STRAND 229 535 230 COLOUR_TEXT_REGION 229 535 230 535 51 STRAND 294 535 295 COLOUR_TEXT_REGION 294 535 295 535 51 STRAND 350 535 353 COLOUR_TEXT_REGION 350 535 353 535 51 STRAND 359 535 363 COLOUR_TEXT_REGION 359 535 363 535 51 STRAND 449 535 450 COLOUR_TEXT_REGION 449 535 450 535 51 STRAND 470 535 473 COLOUR_TEXT_REGION 470 535 473 535 51 STRAND 487 535 489 COLOUR_TEXT_REGION 487 535 489 535 51 STRAND 545 535 548 COLOUR_TEXT_REGION 545 535 548 535 51 HELIX 19 535 33 COLOUR_TEXT_REGION 19 535 33 535 50 HELIX 45 535 63 COLOUR_TEXT_REGION 45 535 63 535 50 HELIX 95 535 110 COLOUR_TEXT_REGION 95 535 110 535 50 HELIX 122 535 142 COLOUR_TEXT_REGION 122 535 142 535 50 HELIX 149 535 171 COLOUR_TEXT_REGION 149 535 171 535 50 HELIX 252 535 264 COLOUR_TEXT_REGION 252 535 264 535 50 HELIX 277 535 286 COLOUR_TEXT_REGION 277 535 286 535 50 HELIX 300 535 312 COLOUR_TEXT_REGION 300 535 312 535 50 HELIX 325 535 345 COLOUR_TEXT_REGION 325 535 345 535 50 HELIX 400 535 415 COLOUR_TEXT_REGION 400 535 415 535 50 HELIX 475 535 486 COLOUR_TEXT_REGION 475 535 486 535 50 HELIX 498 535 517 COLOUR_TEXT_REGION 498 535 517 535 50 HELIX 554 535 562 COLOUR_TEXT_REGION 554 535 562 535 50 STRAND 199 536 202 COLOUR_TEXT_REGION 199 536 202 536 51 STRAND 287 536 287 COLOUR_TEXT_REGION 287 536 287 536 51 STRAND 351 536 354 COLOUR_TEXT_REGION 351 536 354 536 51 STRAND 360 536 363 COLOUR_TEXT_REGION 360 536 363 536 51 STRAND 470 536 471 COLOUR_TEXT_REGION 470 536 471 536 51 STRAND 510 536 517 COLOUR_TEXT_REGION 510 536 517 536 51 STRAND 545 536 545 COLOUR_TEXT_REGION 545 536 545 536 51 STRAND 550 536 554 COLOUR_TEXT_REGION 550 536 554 536 51 HELIX 19 536 34 COLOUR_TEXT_REGION 19 536 34 536 50 HELIX 45 536 64 COLOUR_TEXT_REGION 45 536 64 536 50 HELIX 95 536 116 COLOUR_TEXT_REGION 95 536 116 536 50 HELIX 124 536 142 COLOUR_TEXT_REGION 124 536 142 536 50 HELIX 150 536 170 COLOUR_TEXT_REGION 150 536 170 536 50 HELIX 252 536 264 COLOUR_TEXT_REGION 252 536 264 536 50 HELIX 277 536 286 COLOUR_TEXT_REGION 277 536 286 536 50 HELIX 300 536 313 COLOUR_TEXT_REGION 300 536 313 536 50 HELIX 325 536 347 COLOUR_TEXT_REGION 325 536 347 536 50 HELIX 350 536 350 COLOUR_TEXT_REGION 350 536 350 536 50 HELIX 402 536 415 COLOUR_TEXT_REGION 402 536 415 536 50 HELIX 476 536 489 COLOUR_TEXT_REGION 476 536 489 536 50 HELIX 498 536 507 COLOUR_TEXT_REGION 498 536 507 536 50 HELIX 555 536 562 COLOUR_TEXT_REGION 555 536 562 536 50