SILENT_MODE BLOCK_FILE jp_5v93Exw.concise.blc MAX_NSEQ 956 MAX_INPUT_LEN 958 OUTPUT_FILE jp_5v93Exw.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 211 945 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 946 211 955 H SPACE SUB_CHARS 1 946 211 955 E SPACE SUB_CHARS 1 946 211 955 - SPACE STRAND 6 949 12 COLOUR_TEXT_REGION 6 949 12 949 51 STRAND 32 949 40 COLOUR_TEXT_REGION 32 949 40 949 51 STRAND 53 949 58 COLOUR_TEXT_REGION 53 949 58 949 51 STRAND 62 949 67 COLOUR_TEXT_REGION 62 949 67 949 51 STRAND 113 949 128 COLOUR_TEXT_REGION 113 949 128 949 51 STRAND 138 949 146 COLOUR_TEXT_REGION 138 949 146 949 51 STRAND 151 949 159 COLOUR_TEXT_REGION 151 949 159 949 51 HELIX 17 949 24 COLOUR_TEXT_REGION 17 949 24 949 50 HELIX 45 949 49 COLOUR_TEXT_REGION 45 949 49 949 50 HELIX 100 949 108 COLOUR_TEXT_REGION 100 949 108 949 50 HELIX 165 949 178 COLOUR_TEXT_REGION 165 949 178 949 50 HELIX 189 949 198 COLOUR_TEXT_REGION 189 949 198 949 50 HELIX 200 949 209 COLOUR_TEXT_REGION 200 949 209 949 50 STRAND 6 954 11 COLOUR_TEXT_REGION 6 954 11 954 51 STRAND 32 954 40 COLOUR_TEXT_REGION 32 954 40 954 51 STRAND 53 954 58 COLOUR_TEXT_REGION 53 954 58 954 51 STRAND 62 954 67 COLOUR_TEXT_REGION 62 954 67 954 51 STRAND 76 954 78 COLOUR_TEXT_REGION 76 954 78 954 51 STRAND 113 954 128 COLOUR_TEXT_REGION 113 954 128 954 51 STRAND 138 954 146 COLOUR_TEXT_REGION 138 954 146 954 51 STRAND 151 954 159 COLOUR_TEXT_REGION 151 954 159 954 51 HELIX 16 954 24 COLOUR_TEXT_REGION 16 954 24 954 50 HELIX 45 954 49 COLOUR_TEXT_REGION 45 954 49 954 50 HELIX 100 954 108 COLOUR_TEXT_REGION 100 954 108 954 50 HELIX 165 954 178 COLOUR_TEXT_REGION 165 954 178 954 50 HELIX 189 954 198 COLOUR_TEXT_REGION 189 954 198 954 50 HELIX 200 954 209 COLOUR_TEXT_REGION 200 954 209 954 50 STRAND 6 955 12 COLOUR_TEXT_REGION 6 955 12 955 51 STRAND 32 955 40 COLOUR_TEXT_REGION 32 955 40 955 51 STRAND 53 955 57 COLOUR_TEXT_REGION 53 955 57 955 51 STRAND 62 955 67 COLOUR_TEXT_REGION 62 955 67 955 51 STRAND 113 955 128 COLOUR_TEXT_REGION 113 955 128 955 51 STRAND 139 955 146 COLOUR_TEXT_REGION 139 955 146 955 51 STRAND 151 955 159 COLOUR_TEXT_REGION 151 955 159 955 51 HELIX 18 955 24 COLOUR_TEXT_REGION 18 955 24 955 50 HELIX 45 955 50 COLOUR_TEXT_REGION 45 955 50 955 50 HELIX 88 955 90 COLOUR_TEXT_REGION 88 955 90 955 50 HELIX 102 955 108 COLOUR_TEXT_REGION 102 955 108 955 50 HELIX 165 955 178 COLOUR_TEXT_REGION 165 955 178 955 50 HELIX 189 955 198 COLOUR_TEXT_REGION 189 955 198 955 50 HELIX 200 955 208 COLOUR_TEXT_REGION 200 955 208 955 50