SILENT_MODE BLOCK_FILE jp_FVKz0eF.concise.blc MAX_NSEQ 829 MAX_INPUT_LEN 831 OUTPUT_FILE jp_FVKz0eF.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 233 818 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 819 233 828 H SPACE SUB_CHARS 1 819 233 828 E SPACE SUB_CHARS 1 819 233 828 - SPACE STRAND 9 822 15 COLOUR_TEXT_REGION 9 822 15 822 51 STRAND 20 822 23 COLOUR_TEXT_REGION 20 822 23 822 51 STRAND 54 822 60 COLOUR_TEXT_REGION 54 822 60 822 51 STRAND 81 822 88 COLOUR_TEXT_REGION 81 822 88 822 51 STRAND 106 822 111 COLOUR_TEXT_REGION 106 822 111 822 51 STRAND 141 822 143 COLOUR_TEXT_REGION 141 822 143 822 51 STRAND 210 822 212 COLOUR_TEXT_REGION 210 822 212 822 51 STRAND 224 822 231 COLOUR_TEXT_REGION 224 822 231 822 51 HELIX 65 822 74 COLOUR_TEXT_REGION 65 822 74 822 50 HELIX 93 822 103 COLOUR_TEXT_REGION 93 822 103 822 50 HELIX 182 822 191 COLOUR_TEXT_REGION 182 822 191 822 50 STRAND 9 827 15 COLOUR_TEXT_REGION 9 827 15 827 51 STRAND 20 827 23 COLOUR_TEXT_REGION 20 827 23 827 51 STRAND 54 827 60 COLOUR_TEXT_REGION 54 827 60 827 51 STRAND 81 827 87 COLOUR_TEXT_REGION 81 827 87 827 51 STRAND 106 827 111 COLOUR_TEXT_REGION 106 827 111 827 51 STRAND 136 827 142 COLOUR_TEXT_REGION 136 827 142 827 51 STRAND 176 827 179 COLOUR_TEXT_REGION 176 827 179 827 51 STRAND 210 827 211 COLOUR_TEXT_REGION 210 827 211 827 51 STRAND 224 827 231 COLOUR_TEXT_REGION 224 827 231 827 51 HELIX 65 827 74 COLOUR_TEXT_REGION 65 827 74 827 50 HELIX 93 827 103 COLOUR_TEXT_REGION 93 827 103 827 50 HELIX 182 827 191 COLOUR_TEXT_REGION 182 827 191 827 50 STRAND 9 828 15 COLOUR_TEXT_REGION 9 828 15 828 51 STRAND 20 828 23 COLOUR_TEXT_REGION 20 828 23 828 51 STRAND 55 828 60 COLOUR_TEXT_REGION 55 828 60 828 51 STRAND 81 828 88 COLOUR_TEXT_REGION 81 828 88 828 51 STRAND 107 828 111 COLOUR_TEXT_REGION 107 828 111 828 51 STRAND 142 828 143 COLOUR_TEXT_REGION 142 828 143 828 51 STRAND 209 828 212 COLOUR_TEXT_REGION 209 828 212 828 51 STRAND 224 828 231 COLOUR_TEXT_REGION 224 828 231 828 51 HELIX 65 828 74 COLOUR_TEXT_REGION 65 828 74 828 50 HELIX 95 828 103 COLOUR_TEXT_REGION 95 828 103 828 50 HELIX 182 828 190 COLOUR_TEXT_REGION 182 828 190 828 50