SILENT_MODE BLOCK_FILE jp_hV6qcgq.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_hV6qcgq.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 209 9 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 10 209 19 H SPACE SUB_CHARS 1 10 209 19 E SPACE SUB_CHARS 1 10 209 19 - SPACE STRAND 17 13 20 COLOUR_TEXT_REGION 17 13 20 13 51 STRAND 30 13 30 COLOUR_TEXT_REGION 30 13 30 13 51 STRAND 37 13 41 COLOUR_TEXT_REGION 37 13 41 13 51 STRAND 60 13 63 COLOUR_TEXT_REGION 60 13 63 13 51 STRAND 141 13 146 COLOUR_TEXT_REGION 141 13 146 13 51 STRAND 148 13 156 COLOUR_TEXT_REGION 148 13 156 13 51 STRAND 161 13 162 COLOUR_TEXT_REGION 161 13 162 13 51 STRAND 169 13 173 COLOUR_TEXT_REGION 169 13 173 13 51 STRAND 203 13 207 COLOUR_TEXT_REGION 203 13 207 13 51 HELIX 3 13 11 COLOUR_TEXT_REGION 3 13 11 13 50 HELIX 72 13 84 COLOUR_TEXT_REGION 72 13 84 13 50 HELIX 103 13 110 COLOUR_TEXT_REGION 103 13 110 13 50 HELIX 125 13 135 COLOUR_TEXT_REGION 125 13 135 13 50 HELIX 138 13 140 COLOUR_TEXT_REGION 138 13 140 13 50 HELIX 186 13 197 COLOUR_TEXT_REGION 186 13 197 13 50 STRAND 17 18 19 COLOUR_TEXT_REGION 17 18 19 18 51 STRAND 37 18 41 COLOUR_TEXT_REGION 37 18 41 18 51 STRAND 60 18 63 COLOUR_TEXT_REGION 60 18 63 18 51 STRAND 139 18 156 COLOUR_TEXT_REGION 139 18 156 18 51 STRAND 161 18 162 COLOUR_TEXT_REGION 161 18 162 18 51 STRAND 169 18 173 COLOUR_TEXT_REGION 169 18 173 18 51 STRAND 203 18 207 COLOUR_TEXT_REGION 203 18 207 18 51 HELIX 3 18 11 COLOUR_TEXT_REGION 3 18 11 18 50 HELIX 72 18 84 COLOUR_TEXT_REGION 72 18 84 18 50 HELIX 104 18 109 COLOUR_TEXT_REGION 104 18 109 18 50 HELIX 125 18 136 COLOUR_TEXT_REGION 125 18 136 18 50 HELIX 138 18 138 COLOUR_TEXT_REGION 138 18 138 18 50 HELIX 186 18 197 COLOUR_TEXT_REGION 186 18 197 18 50 STRAND 18 19 21 COLOUR_TEXT_REGION 18 19 21 19 51 STRAND 29 19 31 COLOUR_TEXT_REGION 29 19 31 19 51 STRAND 37 19 42 COLOUR_TEXT_REGION 37 19 42 19 51 STRAND 61 19 63 COLOUR_TEXT_REGION 61 19 63 19 51 STRAND 91 19 92 COLOUR_TEXT_REGION 91 19 92 19 51 STRAND 149 19 157 COLOUR_TEXT_REGION 149 19 157 19 51 STRAND 169 19 173 COLOUR_TEXT_REGION 169 19 173 19 51 STRAND 203 19 207 COLOUR_TEXT_REGION 203 19 207 19 51 HELIX 3 19 11 COLOUR_TEXT_REGION 3 19 11 19 50 HELIX 55 19 57 COLOUR_TEXT_REGION 55 19 57 19 50 HELIX 60 19 60 COLOUR_TEXT_REGION 60 19 60 19 50 HELIX 71 19 84 COLOUR_TEXT_REGION 71 19 84 19 50 HELIX 103 19 112 COLOUR_TEXT_REGION 103 19 112 19 50 HELIX 128 19 134 COLOUR_TEXT_REGION 128 19 134 19 50 HELIX 138 19 145 COLOUR_TEXT_REGION 138 19 145 19 50 HELIX 148 19 148 COLOUR_TEXT_REGION 148 19 148 19 50 HELIX 175 19 175 COLOUR_TEXT_REGION 175 19 175 19 50 HELIX 186 19 198 COLOUR_TEXT_REGION 186 19 198 19 50