SILENT_MODE BLOCK_FILE jp_Cr7GvAL.concise.blc MAX_NSEQ 903 MAX_INPUT_LEN 905 OUTPUT_FILE jp_Cr7GvAL.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 81 892 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 893 81 902 H SPACE SUB_CHARS 1 893 81 902 E SPACE SUB_CHARS 1 893 81 902 - SPACE STRAND 28 896 34 COLOUR_TEXT_REGION 28 896 34 896 51 STRAND 51 896 56 COLOUR_TEXT_REGION 51 896 56 896 51 STRAND 59 896 64 COLOUR_TEXT_REGION 59 896 64 896 51 HELIX 4 896 13 COLOUR_TEXT_REGION 4 896 13 896 50 HELIX 19 896 25 COLOUR_TEXT_REGION 19 896 25 896 50 HELIX 42 896 47 COLOUR_TEXT_REGION 42 896 47 896 50 HELIX 68 896 79 COLOUR_TEXT_REGION 68 896 79 896 50 STRAND 29 901 34 COLOUR_TEXT_REGION 29 901 34 901 51 STRAND 51 901 56 COLOUR_TEXT_REGION 51 901 56 901 51 STRAND 59 901 64 COLOUR_TEXT_REGION 59 901 64 901 51 HELIX 3 901 13 COLOUR_TEXT_REGION 3 901 13 901 50 HELIX 18 901 28 COLOUR_TEXT_REGION 18 901 28 901 50 HELIX 42 901 47 COLOUR_TEXT_REGION 42 901 47 901 50 HELIX 68 901 79 COLOUR_TEXT_REGION 68 901 79 901 50 STRAND 21 902 23 COLOUR_TEXT_REGION 21 902 23 902 51 STRAND 28 902 35 COLOUR_TEXT_REGION 28 902 35 902 51 STRAND 51 902 56 COLOUR_TEXT_REGION 51 902 56 902 51 STRAND 59 902 64 COLOUR_TEXT_REGION 59 902 64 902 51 HELIX 4 902 13 COLOUR_TEXT_REGION 4 902 13 902 50 HELIX 42 902 47 COLOUR_TEXT_REGION 42 902 47 902 50 HELIX 69 902 79 COLOUR_TEXT_REGION 69 902 79 902 50