SILENT_MODE BLOCK_FILE jp_EUCopXo.concise.blc MAX_NSEQ 299 MAX_INPUT_LEN 301 OUTPUT_FILE jp_EUCopXo.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 244 288 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 289 244 298 H SPACE SUB_CHARS 1 289 244 298 E SPACE SUB_CHARS 1 289 244 298 - SPACE STRAND 3 292 6 COLOUR_TEXT_REGION 3 292 6 292 51 STRAND 35 292 35 COLOUR_TEXT_REGION 35 292 35 292 51 STRAND 46 292 54 COLOUR_TEXT_REGION 46 292 54 292 51 STRAND 59 292 65 COLOUR_TEXT_REGION 59 292 65 292 51 STRAND 69 292 75 COLOUR_TEXT_REGION 69 292 75 292 51 STRAND 80 292 84 COLOUR_TEXT_REGION 80 292 84 292 51 STRAND 101 292 103 COLOUR_TEXT_REGION 101 292 103 292 51 STRAND 211 292 215 COLOUR_TEXT_REGION 211 292 215 292 51 STRAND 220 292 224 COLOUR_TEXT_REGION 220 292 224 292 51 HELIX 11 292 25 COLOUR_TEXT_REGION 11 292 25 292 50 HELIX 127 292 137 COLOUR_TEXT_REGION 127 292 137 292 50 HELIX 145 292 156 COLOUR_TEXT_REGION 145 292 156 292 50 HELIX 163 292 172 COLOUR_TEXT_REGION 163 292 172 292 50 HELIX 183 292 200 COLOUR_TEXT_REGION 183 292 200 292 50 HELIX 228 292 239 COLOUR_TEXT_REGION 228 292 239 292 50 STRAND 2 297 6 COLOUR_TEXT_REGION 2 297 6 297 51 STRAND 35 297 36 COLOUR_TEXT_REGION 35 297 36 297 51 STRAND 47 297 54 COLOUR_TEXT_REGION 47 297 54 297 51 STRAND 59 297 65 COLOUR_TEXT_REGION 59 297 65 297 51 STRAND 69 297 75 COLOUR_TEXT_REGION 69 297 75 297 51 STRAND 80 297 84 COLOUR_TEXT_REGION 80 297 84 297 51 STRAND 100 297 100 COLOUR_TEXT_REGION 100 297 100 297 51 STRAND 113 297 114 COLOUR_TEXT_REGION 113 297 114 297 51 STRAND 123 297 124 COLOUR_TEXT_REGION 123 297 124 297 51 STRAND 211 297 215 COLOUR_TEXT_REGION 211 297 215 297 51 STRAND 220 297 224 COLOUR_TEXT_REGION 220 297 224 297 51 HELIX 11 297 25 COLOUR_TEXT_REGION 11 297 25 297 50 HELIX 127 297 137 COLOUR_TEXT_REGION 127 297 137 297 50 HELIX 145 297 157 COLOUR_TEXT_REGION 145 297 157 297 50 HELIX 164 297 171 COLOUR_TEXT_REGION 164 297 171 297 50 HELIX 181 297 200 COLOUR_TEXT_REGION 181 297 200 297 50 HELIX 228 297 239 COLOUR_TEXT_REGION 228 297 239 297 50 STRAND 3 298 6 COLOUR_TEXT_REGION 3 298 6 298 51 STRAND 46 298 54 COLOUR_TEXT_REGION 46 298 54 298 51 STRAND 59 298 65 COLOUR_TEXT_REGION 59 298 65 298 51 STRAND 69 298 76 COLOUR_TEXT_REGION 69 298 76 298 51 STRAND 80 298 83 COLOUR_TEXT_REGION 80 298 83 298 51 STRAND 101 298 104 COLOUR_TEXT_REGION 101 298 104 298 51 STRAND 151 298 155 COLOUR_TEXT_REGION 151 298 155 298 51 STRAND 183 298 185 COLOUR_TEXT_REGION 183 298 185 298 51 STRAND 211 298 215 COLOUR_TEXT_REGION 211 298 215 298 51 STRAND 220 298 225 COLOUR_TEXT_REGION 220 298 225 298 51 HELIX 13 298 25 COLOUR_TEXT_REGION 13 298 25 298 50 HELIX 127 298 138 COLOUR_TEXT_REGION 127 298 138 298 50 HELIX 146 298 150 COLOUR_TEXT_REGION 146 298 150 298 50 HELIX 162 298 172 COLOUR_TEXT_REGION 162 298 172 298 50 HELIX 186 298 199 COLOUR_TEXT_REGION 186 298 199 298 50 HELIX 228 298 240 COLOUR_TEXT_REGION 228 298 240 298 50