SILENT_MODE BLOCK_FILE jp_AHsSxK2.concise.blc MAX_NSEQ 201 MAX_INPUT_LEN 203 OUTPUT_FILE jp_AHsSxK2.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 191 190 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 191 191 200 H SPACE SUB_CHARS 1 191 191 200 E SPACE SUB_CHARS 1 191 191 200 - SPACE STRAND 5 194 17 COLOUR_TEXT_REGION 5 194 17 194 51 STRAND 28 194 36 COLOUR_TEXT_REGION 28 194 36 194 51 STRAND 81 194 85 COLOUR_TEXT_REGION 81 194 85 194 51 STRAND 91 194 95 COLOUR_TEXT_REGION 91 194 95 194 51 STRAND 113 194 116 COLOUR_TEXT_REGION 113 194 116 194 51 STRAND 127 194 131 COLOUR_TEXT_REGION 127 194 131 194 51 STRAND 146 194 151 COLOUR_TEXT_REGION 146 194 151 194 51 STRAND 160 194 166 COLOUR_TEXT_REGION 160 194 166 194 51 HELIX 46 194 69 COLOUR_TEXT_REGION 46 194 69 194 50 HELIX 96 194 96 COLOUR_TEXT_REGION 96 194 96 194 50 HELIX 98 194 108 COLOUR_TEXT_REGION 98 194 108 194 50 HELIX 180 194 186 COLOUR_TEXT_REGION 180 194 186 194 50 STRAND 5 199 18 COLOUR_TEXT_REGION 5 199 18 199 51 STRAND 28 199 36 COLOUR_TEXT_REGION 28 199 36 199 51 STRAND 82 199 84 COLOUR_TEXT_REGION 82 199 84 199 51 STRAND 90 199 96 COLOUR_TEXT_REGION 90 199 96 199 51 STRAND 113 199 116 COLOUR_TEXT_REGION 113 199 116 199 51 STRAND 127 199 131 COLOUR_TEXT_REGION 127 199 131 199 51 STRAND 146 199 151 COLOUR_TEXT_REGION 146 199 151 199 51 STRAND 160 199 166 COLOUR_TEXT_REGION 160 199 166 199 51 HELIX 46 199 69 COLOUR_TEXT_REGION 46 199 69 199 50 HELIX 98 199 99 COLOUR_TEXT_REGION 98 199 99 199 50 HELIX 102 199 108 COLOUR_TEXT_REGION 102 199 108 199 50 HELIX 181 199 186 COLOUR_TEXT_REGION 181 199 186 199 50 STRAND 5 200 16 COLOUR_TEXT_REGION 5 200 16 200 51 STRAND 27 200 36 COLOUR_TEXT_REGION 27 200 36 200 51 STRAND 81 200 85 COLOUR_TEXT_REGION 81 200 85 200 51 STRAND 113 200 117 COLOUR_TEXT_REGION 113 200 117 200 51 STRAND 127 200 130 COLOUR_TEXT_REGION 127 200 130 200 51 STRAND 140 200 140 COLOUR_TEXT_REGION 140 200 140 200 51 STRAND 146 200 151 COLOUR_TEXT_REGION 146 200 151 200 51 STRAND 159 200 167 COLOUR_TEXT_REGION 159 200 167 200 51 HELIX 46 200 69 COLOUR_TEXT_REGION 46 200 69 200 50 HELIX 91 200 108 COLOUR_TEXT_REGION 91 200 108 200 50 HELIX 179 200 187 COLOUR_TEXT_REGION 179 200 187 200 50