Last position-specific scoring matrix computed, weighted observed percentages rounded down, information per position, and relative weight of gapless real matches to pseudocounts A R N D C Q E G H I L K M F P S T W Y V A R N D C Q E G H I L K M F P S T W Y V 1 Y -2 -2 -3 -4 -3 -2 -3 -4 1 -1 -1 -3 -1 5 -4 -2 -2 2 7 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 72 0 0.95 0.11 2 I 2 -3 -3 -3 -1 -2 -3 -2 -3 4 0 -2 0 -1 -2 -1 -1 -3 -2 3 28 0 0 0 0 0 0 0 0 53 0 0 0 0 0 0 0 0 0 19 0.33 0.11 3 W -3 -3 -4 -5 -3 -2 -3 -3 -3 -3 -2 -3 -2 1 -4 -3 -3 11 2 -3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 2.60 0.11 4 Y -2 -2 -3 -4 -3 -2 -3 -4 1 -1 -1 -3 -1 5 -4 -2 -2 2 7 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 72 0 0.95 0.11 5 N -2 -1 7 1 -3 0 -1 -1 0 -4 -4 -1 -3 -3 -2 0 0 -4 -3 -3 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.94 0.11 6 P -1 -3 -2 -2 -3 -2 -1 -3 -3 -3 -3 -1 -3 -4 8 -1 -1 -4 -3 -3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 2.18 0.11 7 D -2 -2 1 7 -4 -1 1 -2 -2 -4 -4 -1 -4 -4 -2 -1 -1 -5 -4 -4 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.13 0.11 8 P -1 -3 -2 -2 -3 -2 -1 -3 -3 -3 -3 -1 -3 -4 8 -1 -1 -4 -3 -3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 2.18 0.11 9 K -1 2 -1 -1 -4 1 0 -2 -1 -3 -3 5 -2 -4 -1 -1 -1 -3 -2 -3 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0.70 0.11 10 E -1 -1 0 4 -4 1 5 -2 -1 -4 -4 0 -3 -4 -2 -1 -1 -4 -3 -3 0 0 0 28 0 0 72 0 0 0 0 0 0 0 0 0 0 0 0 0 0.81 0.11 11 R -2 6 -1 -2 -4 1 0 -3 -1 -3 -3 3 -2 -3 -2 -1 -1 -3 -2 -3 0 81 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0.83 0.11 12 D -2 -2 1 7 -4 -1 1 -2 -2 -4 -4 -1 -4 -4 -2 -1 -1 -5 -4 -4 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.13 0.11 13 S 0 -1 0 -1 -1 -1 -1 -1 -2 -2 -2 -1 -1 -3 -1 3 4 -3 -2 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 64 0 0 0 0.53 0.11 14 Y -2 -2 -3 -4 -3 -2 -3 -4 1 -1 -1 -3 -1 5 -4 -2 -2 2 7 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 72 0 0.95 0.11 15 E 2 -1 0 4 -3 0 3 -1 -1 -3 -3 0 -2 -3 -2 0 -1 -4 -3 -2 28 0 0 35 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0.52 0.11 16 C 0 -3 -2 -3 9 -2 -3 -2 -3 -2 -2 -2 -2 -3 -3 2 0 -3 -3 -1 0 0 0 0 72 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 1.01 0.11 17 G 4 -2 -1 -2 -1 -2 -2 4 -2 -2 -3 -1 -2 -3 -2 0 -1 -3 -3 -1 64 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0.56 0.11 18 E -1 0 -1 1 -4 2 6 -3 0 -4 -3 0 -2 -4 -1 0 -1 -3 -2 -3 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0.91 0.11 19 I -1 -3 -4 -4 -1 -3 -3 -4 -4 5 1 -3 1 -1 -3 -3 -1 -3 -2 3 0 0 0 0 0 0 0 0 0 72 0 0 0 0 0 0 0 0 0 28 0.53 0.11 20 V -1 -3 -3 -3 -1 -2 -3 -3 -3 2 2 -2 1 -1 -3 -1 2 -3 -2 3 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 19 0 0 53 0.34 0.11 21 S 0 3 0 -1 -3 1 0 -1 -1 -3 -3 4 -2 -3 -1 3 0 -3 -2 -2 0 16 0 0 0 0 0 0 0 0 0 48 0 0 0 36 0 0 0 0 0.45 0.11 22 E -1 0 -1 1 -4 2 6 -3 0 -4 -3 0 -2 -4 -1 0 -1 -3 -2 -3 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0.91 0.11 23 T 0 -2 0 -1 -2 -1 -1 3 -2 -2 -2 -1 -2 -3 -2 2 4 -3 -2 -1 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 19 53 0 0 0 0.47 0.11 24 S 3 0 -1 -2 -1 0 -1 -1 -2 -2 -2 2 -2 -3 -1 2 0 -3 -2 -1 54 0 0 0 0 0 0 0 0 0 0 28 0 0 0 18 0 0 0 0 0.36 0.11 25 D -2 -2 1 7 -4 -1 1 -2 -2 -4 -4 -1 -4 -4 -2 -1 -1 -5 -4 -4 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.13 0.11 26 S 0 -1 0 0 -2 0 3 -1 -1 -3 -3 0 -2 -3 -1 3 2 -3 -2 -2 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 53 19 0 0 0 0.44 0.11 27 F -3 -3 -3 -4 -3 -3 -3 -3 -1 -1 -1 -3 -1 5 -4 -3 -3 8 4 -2 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0 28 19 0 1.08 0.11 28 T 0 -2 -2 -2 -1 -2 -2 -3 -3 1 0 -2 0 -2 -2 1 2 -3 -2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 18 0 0 64 0.31 0.11 29 F -2 -3 -3 -4 -2 -3 -3 -4 -1 0 0 -3 0 5 -4 -2 -2 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0 0 19 28 0.58 0.11 30 K -1 4 -1 -1 -4 1 0 -2 -1 -3 -3 5 -2 -3 -2 -1 -1 -3 -2 -3 0 28 0 0 0 0 0 0 0 0 0 72 0 0 0 0 0 0 0 0 0.67 0.11 31 T 0 -2 0 -1 -1 -1 -1 -2 -2 -1 -2 -1 -1 -3 -1 1 5 -3 -2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0.66 0.11 32 V -1 -2 -1 -1 -2 0 2 -3 -2 0 -1 -1 -1 -2 -2 0 3 -3 -2 2 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 35 0 0 36 0.28 0.11 33 D -1 -2 3 4 -3 -1 0 4 -1 -4 -4 -1 -3 -4 -2 0 -1 -4 -3 -4 0 0 19 36 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0.69 0.11 34 Q -1 0 0 0 -4 5 4 -2 0 -3 -3 1 -1 -4 -2 0 -1 -3 -2 -3 0 0 0 0 0 65 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0.74 0.11 35 D -1 -1 0 3 -3 1 4 -2 -1 -3 -3 0 -2 -3 -2 0 2 -3 -2 -2 0 0 0 18 0 0 54 0 0 0 0 0 0 0 0 0 28 0 0 0 0.55 0.11 36 R -2 5 -1 -2 -3 0 -1 -3 4 -1 1 1 0 -2 -3 -2 -2 -3 -1 -2 0 53 0 0 0 0 0 0 19 0 28 0 0 0 0 0 0 0 0 0 0.44 0.11 37 Q 0 -1 0 -1 -2 2 0 -2 -1 -2 -2 0 -1 -3 -1 2 4 -3 -2 -1 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 19 64 0 0 0 0.47 0.11 38 V -1 -3 -3 -4 -1 -3 -3 -4 -4 2 1 -3 0 -1 -3 -2 0 -3 -2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0.53 0.11 39 K -1 2 -1 -1 -4 1 0 -2 -1 -3 -3 5 -2 -4 -1 -1 -1 -3 -2 -3 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0.70 0.11 40 K -1 1 -1 -2 -3 1 0 -2 -1 -1 -1 5 4 -2 -2 -1 -1 -3 -2 -1 0 0 0 0 0 0 0 0 0 0 0 72 28 0 0 0 0 0 0 0 0.44 0.11 41 D -2 -2 1 7 -4 -1 1 -2 -2 -4 -4 -1 -4 -4 -2 -1 -1 -5 -4 -4 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.13 0.11 42 D -2 -2 1 6 -4 0 1 -2 -1 -3 -4 -1 -3 -4 -2 0 -1 -5 -3 -3 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.03 0.06 43 A 4 -2 -2 -2 -1 -1 -1 0 -2 -2 -2 -1 -1 -2 -1 1 0 -3 -2 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.48 0.06 44 N -2 -1 6 1 -3 0 0 -1 0 -4 -4 0 -2 -3 -2 0 0 -4 -2 -3 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.83 0.06 45 Q -1 1 0 0 -3 6 2 -2 0 -3 -2 1 -1 -3 -2 0 -1 -2 -2 -2 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.75 0.06 K Lambda Standard Ungapped 0.1295 0.3099 Standard Gapped 0.0410 0.2670 PSI Ungapped 0.1461 0.3102 PSI Gapped 0.0447 0.2670