SILENT_MODE BLOCK_FILE jp_2WSz9hP.concise.blc MAX_NSEQ 959 MAX_INPUT_LEN 961 OUTPUT_FILE jp_2WSz9hP.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 322 948 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 949 322 958 H SPACE SUB_CHARS 1 949 322 958 E SPACE SUB_CHARS 1 949 322 958 - SPACE STRAND 40 952 43 COLOUR_TEXT_REGION 40 952 43 952 51 STRAND 193 952 198 COLOUR_TEXT_REGION 193 952 198 952 51 STRAND 238 952 244 COLOUR_TEXT_REGION 238 952 244 952 51 HELIX 4 952 13 COLOUR_TEXT_REGION 4 952 13 952 50 HELIX 22 952 33 COLOUR_TEXT_REGION 22 952 33 952 50 HELIX 54 952 84 COLOUR_TEXT_REGION 54 952 84 952 50 HELIX 89 952 97 COLOUR_TEXT_REGION 89 952 97 952 50 HELIX 101 952 108 COLOUR_TEXT_REGION 101 952 108 952 50 HELIX 118 952 125 COLOUR_TEXT_REGION 118 952 125 952 50 HELIX 127 952 136 COLOUR_TEXT_REGION 127 952 136 952 50 HELIX 142 952 150 COLOUR_TEXT_REGION 142 952 150 952 50 HELIX 159 952 174 COLOUR_TEXT_REGION 159 952 174 952 50 HELIX 178 952 190 COLOUR_TEXT_REGION 178 952 190 952 50 HELIX 213 952 213 COLOUR_TEXT_REGION 213 952 213 952 50 HELIX 225 952 235 COLOUR_TEXT_REGION 225 952 235 952 50 HELIX 249 952 262 COLOUR_TEXT_REGION 249 952 262 952 50 HELIX 271 952 320 COLOUR_TEXT_REGION 271 952 320 952 50 STRAND 40 957 43 COLOUR_TEXT_REGION 40 957 43 957 51 STRAND 193 957 198 COLOUR_TEXT_REGION 193 957 198 957 51 STRAND 238 957 245 COLOUR_TEXT_REGION 238 957 245 957 51 HELIX 4 957 13 COLOUR_TEXT_REGION 4 957 13 957 50 HELIX 22 957 33 COLOUR_TEXT_REGION 22 957 33 957 50 HELIX 46 957 48 COLOUR_TEXT_REGION 46 957 48 957 50 HELIX 54 957 84 COLOUR_TEXT_REGION 54 957 84 957 50 HELIX 89 957 97 COLOUR_TEXT_REGION 89 957 97 957 50 HELIX 101 957 108 COLOUR_TEXT_REGION 101 957 108 957 50 HELIX 118 957 136 COLOUR_TEXT_REGION 118 957 136 957 50 HELIX 142 957 149 COLOUR_TEXT_REGION 142 957 149 957 50 HELIX 159 957 174 COLOUR_TEXT_REGION 159 957 174 957 50 HELIX 178 957 190 COLOUR_TEXT_REGION 178 957 190 957 50 HELIX 216 957 218 COLOUR_TEXT_REGION 216 957 218 957 50 HELIX 226 957 235 COLOUR_TEXT_REGION 226 957 235 957 50 HELIX 248 957 261 COLOUR_TEXT_REGION 248 957 261 957 50 HELIX 271 957 320 COLOUR_TEXT_REGION 271 957 320 957 50 STRAND 38 958 43 COLOUR_TEXT_REGION 38 958 43 958 51 STRAND 194 958 199 COLOUR_TEXT_REGION 194 958 199 958 51 STRAND 238 958 243 COLOUR_TEXT_REGION 238 958 243 958 51 HELIX 3 958 14 COLOUR_TEXT_REGION 3 958 14 958 50 HELIX 22 958 33 COLOUR_TEXT_REGION 22 958 33 958 50 HELIX 54 958 83 COLOUR_TEXT_REGION 54 958 83 958 50 HELIX 89 958 97 COLOUR_TEXT_REGION 89 958 97 958 50 HELIX 101 958 108 COLOUR_TEXT_REGION 101 958 108 958 50 HELIX 118 958 124 COLOUR_TEXT_REGION 118 958 124 958 50 HELIX 128 958 136 COLOUR_TEXT_REGION 128 958 136 958 50 HELIX 142 958 150 COLOUR_TEXT_REGION 142 958 150 958 50 HELIX 159 958 175 COLOUR_TEXT_REGION 159 958 175 958 50 HELIX 178 958 191 COLOUR_TEXT_REGION 178 958 191 958 50 HELIX 193 958 193 COLOUR_TEXT_REGION 193 958 193 958 50 HELIX 208 958 213 COLOUR_TEXT_REGION 208 958 213 958 50 HELIX 225 958 235 COLOUR_TEXT_REGION 225 958 235 958 50 HELIX 249 958 262 COLOUR_TEXT_REGION 249 958 262 958 50 HELIX 272 958 320 COLOUR_TEXT_REGION 272 958 320 958 50