SILENT_MODE BLOCK_FILE jp_WJ36MQN.concise.blc MAX_NSEQ 658 MAX_INPUT_LEN 660 OUTPUT_FILE jp_WJ36MQN.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 196 647 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 648 196 657 H SPACE SUB_CHARS 1 648 196 657 E SPACE SUB_CHARS 1 648 196 657 - SPACE STRAND 10 651 14 COLOUR_TEXT_REGION 10 651 14 651 51 STRAND 17 651 30 COLOUR_TEXT_REGION 17 651 30 651 51 STRAND 40 651 41 COLOUR_TEXT_REGION 40 651 41 651 51 STRAND 55 651 59 COLOUR_TEXT_REGION 55 651 59 651 51 STRAND 63 651 68 COLOUR_TEXT_REGION 63 651 68 651 51 STRAND 71 651 76 COLOUR_TEXT_REGION 71 651 76 651 51 STRAND 101 651 106 COLOUR_TEXT_REGION 101 651 106 651 51 STRAND 111 651 116 COLOUR_TEXT_REGION 111 651 116 651 51 STRAND 120 651 123 COLOUR_TEXT_REGION 120 651 123 651 51 STRAND 150 651 154 COLOUR_TEXT_REGION 150 651 154 651 51 STRAND 159 651 163 COLOUR_TEXT_REGION 159 651 163 651 51 STRAND 168 651 172 COLOUR_TEXT_REGION 168 651 172 651 51 STRAND 177 651 178 COLOUR_TEXT_REGION 177 651 178 651 51 STRAND 10 656 13 COLOUR_TEXT_REGION 10 656 13 656 51 STRAND 17 656 22 COLOUR_TEXT_REGION 17 656 22 656 51 STRAND 25 656 30 COLOUR_TEXT_REGION 25 656 30 656 51 STRAND 55 656 59 COLOUR_TEXT_REGION 55 656 59 656 51 STRAND 63 656 68 COLOUR_TEXT_REGION 63 656 68 656 51 STRAND 71 656 76 COLOUR_TEXT_REGION 71 656 76 656 51 STRAND 102 656 106 COLOUR_TEXT_REGION 102 656 106 656 51 STRAND 111 656 116 COLOUR_TEXT_REGION 111 656 116 656 51 STRAND 119 656 124 COLOUR_TEXT_REGION 119 656 124 656 51 STRAND 150 656 154 COLOUR_TEXT_REGION 150 656 154 656 51 STRAND 159 656 164 COLOUR_TEXT_REGION 159 656 164 656 51 STRAND 168 656 172 COLOUR_TEXT_REGION 168 656 172 656 51 STRAND 10 657 14 COLOUR_TEXT_REGION 10 657 14 657 51 STRAND 18 657 30 COLOUR_TEXT_REGION 18 657 30 657 51 STRAND 40 657 44 COLOUR_TEXT_REGION 40 657 44 657 51 STRAND 56 657 58 COLOUR_TEXT_REGION 56 657 58 657 51 STRAND 63 657 68 COLOUR_TEXT_REGION 63 657 68 657 51 STRAND 71 657 76 COLOUR_TEXT_REGION 71 657 76 657 51 STRAND 87 657 87 COLOUR_TEXT_REGION 87 657 87 657 51 STRAND 100 657 105 COLOUR_TEXT_REGION 100 657 105 657 51 STRAND 111 657 116 COLOUR_TEXT_REGION 111 657 116 657 51 STRAND 152 657 154 COLOUR_TEXT_REGION 152 657 154 657 51 STRAND 159 657 163 COLOUR_TEXT_REGION 159 657 163 657 51 STRAND 167 657 171 COLOUR_TEXT_REGION 167 657 171 657 51 STRAND 176 657 179 COLOUR_TEXT_REGION 176 657 179 657 51