SILENT_MODE BLOCK_FILE jp_oLBXZTU.concise.blc MAX_NSEQ 168 MAX_INPUT_LEN 170 OUTPUT_FILE jp_oLBXZTU.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 165 157 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 158 165 167 H SPACE SUB_CHARS 1 158 165 167 E SPACE SUB_CHARS 1 158 165 167 - SPACE HELIX 6 161 14 COLOUR_TEXT_REGION 6 161 14 161 50 HELIX 19 161 41 COLOUR_TEXT_REGION 19 161 41 161 50 HELIX 50 161 56 COLOUR_TEXT_REGION 50 161 56 161 50 HELIX 67 161 76 COLOUR_TEXT_REGION 67 161 76 161 50 HELIX 82 161 99 COLOUR_TEXT_REGION 82 161 99 161 50 HELIX 110 161 118 COLOUR_TEXT_REGION 110 161 118 161 50 HELIX 134 161 163 COLOUR_TEXT_REGION 134 161 163 161 50 HELIX 6 166 14 COLOUR_TEXT_REGION 6 166 14 166 50 HELIX 19 166 41 COLOUR_TEXT_REGION 19 166 41 166 50 HELIX 50 166 57 COLOUR_TEXT_REGION 50 166 57 166 50 HELIX 67 166 76 COLOUR_TEXT_REGION 67 166 76 166 50 HELIX 82 166 98 COLOUR_TEXT_REGION 82 166 98 166 50 HELIX 110 166 118 COLOUR_TEXT_REGION 110 166 118 166 50 HELIX 134 166 163 COLOUR_TEXT_REGION 134 166 163 166 50 HELIX 6 167 14 COLOUR_TEXT_REGION 6 167 14 167 50 HELIX 20 167 41 COLOUR_TEXT_REGION 20 167 41 167 50 HELIX 49 167 56 COLOUR_TEXT_REGION 49 167 56 167 50 HELIX 67 167 76 COLOUR_TEXT_REGION 67 167 76 167 50 HELIX 82 167 99 COLOUR_TEXT_REGION 82 167 99 167 50 HELIX 110 167 118 COLOUR_TEXT_REGION 110 167 118 167 50 HELIX 133 167 163 COLOUR_TEXT_REGION 133 167 163 167 50