SILENT_MODE BLOCK_FILE jp_Aet8nZl.concise.blc MAX_NSEQ 706 MAX_INPUT_LEN 708 OUTPUT_FILE jp_Aet8nZl.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 250 695 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 696 250 705 H SPACE SUB_CHARS 1 696 250 705 E SPACE SUB_CHARS 1 696 250 705 - SPACE STRAND 7 699 10 COLOUR_TEXT_REGION 7 699 10 699 51 STRAND 14 699 16 COLOUR_TEXT_REGION 14 699 16 699 51 STRAND 30 699 33 COLOUR_TEXT_REGION 30 699 33 699 51 STRAND 36 699 43 COLOUR_TEXT_REGION 36 699 43 699 51 STRAND 64 699 70 COLOUR_TEXT_REGION 64 699 70 699 51 STRAND 82 699 91 COLOUR_TEXT_REGION 82 699 91 699 51 STRAND 95 699 103 COLOUR_TEXT_REGION 95 699 103 699 51 STRAND 122 699 130 COLOUR_TEXT_REGION 122 699 130 699 51 STRAND 134 699 141 COLOUR_TEXT_REGION 134 699 141 699 51 STRAND 145 699 151 COLOUR_TEXT_REGION 145 699 151 699 51 STRAND 171 699 177 COLOUR_TEXT_REGION 171 699 177 699 51 STRAND 190 699 193 COLOUR_TEXT_REGION 190 699 193 699 51 STRAND 197 699 198 COLOUR_TEXT_REGION 197 699 198 699 51 STRAND 201 699 211 COLOUR_TEXT_REGION 201 699 211 699 51 STRAND 226 699 239 COLOUR_TEXT_REGION 226 699 239 699 51 STRAND 244 699 245 COLOUR_TEXT_REGION 244 699 245 699 51 HELIX 46 699 51 COLOUR_TEXT_REGION 46 699 51 699 50 HELIX 108 699 117 COLOUR_TEXT_REGION 108 699 117 699 50 HELIX 247 699 247 COLOUR_TEXT_REGION 247 699 247 699 50 STRAND 6 704 10 COLOUR_TEXT_REGION 6 704 10 704 51 STRAND 14 704 15 COLOUR_TEXT_REGION 14 704 15 704 51 STRAND 31 704 33 COLOUR_TEXT_REGION 31 704 33 704 51 STRAND 36 704 43 COLOUR_TEXT_REGION 36 704 43 704 51 STRAND 64 704 70 COLOUR_TEXT_REGION 64 704 70 704 51 STRAND 82 704 91 COLOUR_TEXT_REGION 82 704 91 704 51 STRAND 95 704 103 COLOUR_TEXT_REGION 95 704 103 704 51 STRAND 122 704 130 COLOUR_TEXT_REGION 122 704 130 704 51 STRAND 134 704 141 COLOUR_TEXT_REGION 134 704 141 704 51 STRAND 145 704 151 COLOUR_TEXT_REGION 145 704 151 704 51 STRAND 171 704 177 COLOUR_TEXT_REGION 171 704 177 704 51 STRAND 189 704 192 COLOUR_TEXT_REGION 189 704 192 704 51 STRAND 201 704 211 COLOUR_TEXT_REGION 201 704 211 704 51 STRAND 226 704 239 COLOUR_TEXT_REGION 226 704 239 704 51 STRAND 244 704 244 COLOUR_TEXT_REGION 244 704 244 704 51 HELIX 46 704 51 COLOUR_TEXT_REGION 46 704 51 704 50 HELIX 108 704 117 COLOUR_TEXT_REGION 108 704 117 704 50 HELIX 245 704 245 COLOUR_TEXT_REGION 245 704 245 704 50 HELIX 247 704 248 COLOUR_TEXT_REGION 247 704 248 704 50 STRAND 8 705 10 COLOUR_TEXT_REGION 8 705 10 705 51 STRAND 14 705 16 COLOUR_TEXT_REGION 14 705 16 705 51 STRAND 30 705 43 COLOUR_TEXT_REGION 30 705 43 705 51 STRAND 63 705 71 COLOUR_TEXT_REGION 63 705 71 705 51 STRAND 82 705 91 COLOUR_TEXT_REGION 82 705 91 705 51 STRAND 96 705 103 COLOUR_TEXT_REGION 96 705 103 705 51 STRAND 122 705 130 COLOUR_TEXT_REGION 122 705 130 705 51 STRAND 134 705 140 COLOUR_TEXT_REGION 134 705 140 705 51 STRAND 145 705 152 COLOUR_TEXT_REGION 145 705 152 705 51 STRAND 172 705 177 COLOUR_TEXT_REGION 172 705 177 705 51 STRAND 192 705 199 COLOUR_TEXT_REGION 192 705 199 705 51 STRAND 202 705 211 COLOUR_TEXT_REGION 202 705 211 705 51 STRAND 225 705 238 COLOUR_TEXT_REGION 225 705 238 705 51 STRAND 244 705 246 COLOUR_TEXT_REGION 244 705 246 705 51 HELIX 46 705 52 COLOUR_TEXT_REGION 46 705 52 705 50 HELIX 107 705 116 COLOUR_TEXT_REGION 107 705 116 705 50 HELIX 247 705 247 COLOUR_TEXT_REGION 247 705 247 705 50