SILENT_MODE BLOCK_FILE jp_3mBscP4.concise.blc MAX_NSEQ 1114 MAX_INPUT_LEN 1116 OUTPUT_FILE jp_3mBscP4.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 169 1103 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1104 169 1113 H SPACE SUB_CHARS 1 1104 169 1113 E SPACE SUB_CHARS 1 1104 169 1113 - SPACE STRAND 13 1107 17 COLOUR_TEXT_REGION 13 1107 17 1107 51 STRAND 89 1107 93 COLOUR_TEXT_REGION 89 1107 93 1107 51 STRAND 125 1107 131 COLOUR_TEXT_REGION 125 1107 131 1107 51 STRAND 142 1107 150 COLOUR_TEXT_REGION 142 1107 150 1107 51 STRAND 154 1107 157 COLOUR_TEXT_REGION 154 1107 157 1107 51 HELIX 21 1107 32 COLOUR_TEXT_REGION 21 1107 32 1107 50 HELIX 39 1107 62 COLOUR_TEXT_REGION 39 1107 62 1107 50 HELIX 73 1107 85 COLOUR_TEXT_REGION 73 1107 85 1107 50 HELIX 100 1107 109 COLOUR_TEXT_REGION 100 1107 109 1107 50 HELIX 114 1107 119 COLOUR_TEXT_REGION 114 1107 119 1107 50 STRAND 13 1112 17 COLOUR_TEXT_REGION 13 1112 17 1112 51 STRAND 66 1112 67 COLOUR_TEXT_REGION 66 1112 67 1112 51 STRAND 89 1112 93 COLOUR_TEXT_REGION 89 1112 93 1112 51 STRAND 125 1112 131 COLOUR_TEXT_REGION 125 1112 131 1112 51 STRAND 142 1112 150 COLOUR_TEXT_REGION 142 1112 150 1112 51 STRAND 154 1112 157 COLOUR_TEXT_REGION 154 1112 157 1112 51 HELIX 21 1112 32 COLOUR_TEXT_REGION 21 1112 32 1112 50 HELIX 39 1112 48 COLOUR_TEXT_REGION 39 1112 48 1112 50 HELIX 51 1112 61 COLOUR_TEXT_REGION 51 1112 61 1112 50 HELIX 74 1112 85 COLOUR_TEXT_REGION 74 1112 85 1112 50 HELIX 101 1112 109 COLOUR_TEXT_REGION 101 1112 109 1112 50 HELIX 114 1112 119 COLOUR_TEXT_REGION 114 1112 119 1112 50 STRAND 12 1113 17 COLOUR_TEXT_REGION 12 1113 17 1113 51 STRAND 89 1113 94 COLOUR_TEXT_REGION 89 1113 94 1113 51 STRAND 126 1113 131 COLOUR_TEXT_REGION 126 1113 131 1113 51 STRAND 142 1113 150 COLOUR_TEXT_REGION 142 1113 150 1113 51 STRAND 154 1113 157 COLOUR_TEXT_REGION 154 1113 157 1113 51 HELIX 20 1113 31 COLOUR_TEXT_REGION 20 1113 31 1113 50 HELIX 39 1113 62 COLOUR_TEXT_REGION 39 1113 62 1113 50 HELIX 72 1113 85 COLOUR_TEXT_REGION 72 1113 85 1113 50 HELIX 100 1113 109 COLOUR_TEXT_REGION 100 1113 109 1113 50 HELIX 114 1113 119 COLOUR_TEXT_REGION 114 1113 119 1113 50