SILENT_MODE BLOCK_FILE jp_LQnuhmD.concise.blc MAX_NSEQ 918 MAX_INPUT_LEN 920 OUTPUT_FILE jp_LQnuhmD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 314 907 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 908 314 917 H SPACE SUB_CHARS 1 908 314 917 E SPACE SUB_CHARS 1 908 314 917 - SPACE STRAND 2 911 5 COLOUR_TEXT_REGION 2 911 5 911 51 STRAND 28 911 32 COLOUR_TEXT_REGION 28 911 32 911 51 STRAND 35 911 40 COLOUR_TEXT_REGION 35 911 40 911 51 STRAND 46 911 49 COLOUR_TEXT_REGION 46 911 49 911 51 STRAND 85 911 90 COLOUR_TEXT_REGION 85 911 90 911 51 STRAND 93 911 100 COLOUR_TEXT_REGION 93 911 100 911 51 STRAND 108 911 116 COLOUR_TEXT_REGION 108 911 116 911 51 STRAND 150 911 152 COLOUR_TEXT_REGION 150 911 152 911 51 STRAND 157 911 161 COLOUR_TEXT_REGION 157 911 161 911 51 STRAND 186 911 189 COLOUR_TEXT_REGION 186 911 189 911 51 STRAND 199 911 199 COLOUR_TEXT_REGION 199 911 199 911 51 STRAND 203 911 206 COLOUR_TEXT_REGION 203 911 206 911 51 STRAND 210 911 217 COLOUR_TEXT_REGION 210 911 217 911 51 STRAND 229 911 234 COLOUR_TEXT_REGION 229 911 234 911 51 STRAND 265 911 267 COLOUR_TEXT_REGION 265 911 267 911 51 STRAND 272 911 276 COLOUR_TEXT_REGION 272 911 276 911 51 STRAND 280 911 286 COLOUR_TEXT_REGION 280 911 286 911 51 STRAND 295 911 304 COLOUR_TEXT_REGION 295 911 304 911 51 STRAND 310 911 313 COLOUR_TEXT_REGION 310 911 313 911 51 STRAND 3 916 5 COLOUR_TEXT_REGION 3 916 5 916 51 STRAND 28 916 32 COLOUR_TEXT_REGION 28 916 32 916 51 STRAND 35 916 40 COLOUR_TEXT_REGION 35 916 40 916 51 STRAND 46 916 49 COLOUR_TEXT_REGION 46 916 49 916 51 STRAND 82 916 90 COLOUR_TEXT_REGION 82 916 90 916 51 STRAND 93 916 100 COLOUR_TEXT_REGION 93 916 100 916 51 STRAND 108 916 115 COLOUR_TEXT_REGION 108 916 115 916 51 STRAND 150 916 152 COLOUR_TEXT_REGION 150 916 152 916 51 STRAND 157 916 161 COLOUR_TEXT_REGION 157 916 161 916 51 STRAND 169 916 171 COLOUR_TEXT_REGION 169 916 171 916 51 STRAND 186 916 188 COLOUR_TEXT_REGION 186 916 188 916 51 STRAND 199 916 200 COLOUR_TEXT_REGION 199 916 200 916 51 STRAND 203 916 206 COLOUR_TEXT_REGION 203 916 206 916 51 STRAND 210 916 217 COLOUR_TEXT_REGION 210 916 217 916 51 STRAND 228 916 234 COLOUR_TEXT_REGION 228 916 234 916 51 STRAND 265 916 266 COLOUR_TEXT_REGION 265 916 266 916 51 STRAND 272 916 276 COLOUR_TEXT_REGION 272 916 276 916 51 STRAND 280 916 286 COLOUR_TEXT_REGION 280 916 286 916 51 STRAND 295 916 304 COLOUR_TEXT_REGION 295 916 304 916 51 STRAND 310 916 313 COLOUR_TEXT_REGION 310 916 313 916 51 STRAND 2 917 5 COLOUR_TEXT_REGION 2 917 5 917 51 STRAND 28 917 32 COLOUR_TEXT_REGION 28 917 32 917 51 STRAND 35 917 40 COLOUR_TEXT_REGION 35 917 40 917 51 STRAND 46 917 49 COLOUR_TEXT_REGION 46 917 49 917 51 STRAND 86 917 89 COLOUR_TEXT_REGION 86 917 89 917 51 STRAND 94 917 100 COLOUR_TEXT_REGION 94 917 100 917 51 STRAND 107 917 117 COLOUR_TEXT_REGION 107 917 117 917 51 STRAND 132 917 133 COLOUR_TEXT_REGION 132 917 133 917 51 STRAND 157 917 160 COLOUR_TEXT_REGION 157 917 160 917 51 STRAND 185 917 189 COLOUR_TEXT_REGION 185 917 189 917 51 STRAND 198 917 199 COLOUR_TEXT_REGION 198 917 199 917 51 STRAND 203 917 205 COLOUR_TEXT_REGION 203 917 205 917 51 STRAND 211 917 216 COLOUR_TEXT_REGION 211 917 216 917 51 STRAND 230 917 234 COLOUR_TEXT_REGION 230 917 234 917 51 STRAND 258 917 258 COLOUR_TEXT_REGION 258 917 258 917 51 STRAND 265 917 267 COLOUR_TEXT_REGION 265 917 267 917 51 STRAND 272 917 276 COLOUR_TEXT_REGION 272 917 276 917 51 STRAND 280 917 287 COLOUR_TEXT_REGION 280 917 287 917 51 STRAND 295 917 304 COLOUR_TEXT_REGION 295 917 304 917 51 STRAND 309 917 313 COLOUR_TEXT_REGION 309 917 313 917 51