SILENT_MODE BLOCK_FILE jp_pgqgZu7.concise.blc MAX_NSEQ 459 MAX_INPUT_LEN 461 OUTPUT_FILE jp_pgqgZu7.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 101 448 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 449 101 458 H SPACE SUB_CHARS 1 449 101 458 E SPACE SUB_CHARS 1 449 101 458 - SPACE STRAND 10 452 14 COLOUR_TEXT_REGION 10 452 14 452 51 STRAND 17 452 23 COLOUR_TEXT_REGION 17 452 23 452 51 STRAND 30 452 34 COLOUR_TEXT_REGION 30 452 34 452 51 STRAND 40 452 41 COLOUR_TEXT_REGION 40 452 41 452 51 STRAND 46 452 49 COLOUR_TEXT_REGION 46 452 49 452 51 STRAND 61 452 63 COLOUR_TEXT_REGION 61 452 63 452 51 STRAND 68 452 73 COLOUR_TEXT_REGION 68 452 73 452 51 STRAND 82 452 85 COLOUR_TEXT_REGION 82 452 85 452 51 STRAND 90 452 94 COLOUR_TEXT_REGION 90 452 94 452 51 STRAND 96 452 100 COLOUR_TEXT_REGION 96 452 100 452 51 STRAND 11 457 14 COLOUR_TEXT_REGION 11 457 14 457 51 STRAND 17 457 23 COLOUR_TEXT_REGION 17 457 23 457 51 STRAND 31 457 34 COLOUR_TEXT_REGION 31 457 34 457 51 STRAND 40 457 42 COLOUR_TEXT_REGION 40 457 42 457 51 STRAND 46 457 49 COLOUR_TEXT_REGION 46 457 49 457 51 STRAND 61 457 63 COLOUR_TEXT_REGION 61 457 63 457 51 STRAND 68 457 73 COLOUR_TEXT_REGION 68 457 73 457 51 STRAND 84 457 85 COLOUR_TEXT_REGION 84 457 85 457 51 STRAND 90 457 100 COLOUR_TEXT_REGION 90 457 100 457 51 HELIX 5 457 5 COLOUR_TEXT_REGION 5 457 5 457 50 STRAND 10 458 14 COLOUR_TEXT_REGION 10 458 14 458 51 STRAND 17 458 23 COLOUR_TEXT_REGION 17 458 23 458 51 STRAND 29 458 35 COLOUR_TEXT_REGION 29 458 35 458 51 STRAND 46 458 49 COLOUR_TEXT_REGION 46 458 49 458 51 STRAND 60 458 64 COLOUR_TEXT_REGION 60 458 64 458 51 STRAND 68 458 73 COLOUR_TEXT_REGION 68 458 73 458 51 STRAND 80 458 85 COLOUR_TEXT_REGION 80 458 85 458 51 STRAND 90 458 93 COLOUR_TEXT_REGION 90 458 93 458 51 STRAND 97 458 100 COLOUR_TEXT_REGION 97 458 100 458 51