SILENT_MODE BLOCK_FILE jp_jB4yIwu.concise.blc MAX_NSEQ 179 MAX_INPUT_LEN 181 OUTPUT_FILE jp_jB4yIwu.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 179 168 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 169 179 178 H SPACE SUB_CHARS 1 169 179 178 E SPACE SUB_CHARS 1 169 179 178 - SPACE STRAND 14 172 17 COLOUR_TEXT_REGION 14 172 17 172 51 STRAND 29 172 33 COLOUR_TEXT_REGION 29 172 33 172 51 STRAND 38 172 45 COLOUR_TEXT_REGION 38 172 45 172 51 STRAND 53 172 60 COLOUR_TEXT_REGION 53 172 60 172 51 STRAND 71 172 72 COLOUR_TEXT_REGION 71 172 72 172 51 STRAND 85 172 89 COLOUR_TEXT_REGION 85 172 89 172 51 STRAND 94 172 98 COLOUR_TEXT_REGION 94 172 98 172 51 STRAND 104 172 110 COLOUR_TEXT_REGION 104 172 110 172 51 STRAND 120 172 129 COLOUR_TEXT_REGION 120 172 129 172 51 STRAND 142 172 149 COLOUR_TEXT_REGION 142 172 149 172 51 STRAND 154 172 165 COLOUR_TEXT_REGION 154 172 165 172 51 HELIX 70 172 70 COLOUR_TEXT_REGION 70 172 70 172 50 STRAND 14 177 17 COLOUR_TEXT_REGION 14 177 17 177 51 STRAND 29 177 32 COLOUR_TEXT_REGION 29 177 32 177 51 STRAND 38 177 45 COLOUR_TEXT_REGION 38 177 45 177 51 STRAND 53 177 60 COLOUR_TEXT_REGION 53 177 60 177 51 STRAND 70 177 72 COLOUR_TEXT_REGION 70 177 72 177 51 STRAND 86 177 88 COLOUR_TEXT_REGION 86 177 88 177 51 STRAND 94 177 98 COLOUR_TEXT_REGION 94 177 98 177 51 STRAND 104 177 110 COLOUR_TEXT_REGION 104 177 110 177 51 STRAND 120 177 129 COLOUR_TEXT_REGION 120 177 129 177 51 STRAND 141 177 149 COLOUR_TEXT_REGION 141 177 149 177 51 STRAND 154 177 165 COLOUR_TEXT_REGION 154 177 165 177 51 HELIX 174 177 175 COLOUR_TEXT_REGION 174 177 175 177 50 STRAND 14 178 18 COLOUR_TEXT_REGION 14 178 18 178 51 STRAND 29 178 33 COLOUR_TEXT_REGION 29 178 33 178 51 STRAND 37 178 44 COLOUR_TEXT_REGION 37 178 44 178 51 STRAND 53 178 60 COLOUR_TEXT_REGION 53 178 60 178 51 STRAND 85 178 89 COLOUR_TEXT_REGION 85 178 89 178 51 STRAND 94 178 98 COLOUR_TEXT_REGION 94 178 98 178 51 STRAND 104 178 109 COLOUR_TEXT_REGION 104 178 109 178 51 STRAND 121 178 128 COLOUR_TEXT_REGION 121 178 128 178 51 STRAND 142 178 149 COLOUR_TEXT_REGION 142 178 149 178 51 STRAND 154 178 156 COLOUR_TEXT_REGION 154 178 156 178 51 STRAND 160 178 166 COLOUR_TEXT_REGION 160 178 166 178 51 HELIX 69 178 72 COLOUR_TEXT_REGION 69 178 72 178 50