QUERY : MKHLSDELLIESYFKAKELNLSPEFIELIEKEIQRRSLTHKI : QUERY
UniRef90_Q7WY62 : MRKLSDELLIESYFKATEMNLNRDFIELIENEIKRRSLGHII : UniRef90_Q7WY62
UniRef90_UPI000248DCC4 : MRTLKNDWLIQCYMDAVRLQLDPEFIDLLLEEIHRRS----- : UniRef90_UPI000248DCC4
UniRef90_M5JI06 : MKCLPDDLLIESYYKAKELQLSPEFIQLIEREIVCRRLHHKL : UniRef90_M5JI06
UniRef90_D3FXI4 : MNNLSDELLIETYYKAIELDLSPDFIELIRIEISRRSLSDKI : UniRef90_D3FXI4
UniRef90_Q8EPU6 : MENLSDELLLESYYTACELQLSPDFLSLFEEEIHKRCLSHKI : UniRef90_Q8EPU6
UniRef90_A6CS21 : MRKLSDDLLIESYYKAKDLKLNPDFIRLIETEIHRRSLSYRI : UniRef90_A6CS21
UniRef90_L5N421 : MKQLSDSLLIQSYHKAIELNLSEEFIQQIEAEMKKRSLNHRL : UniRef90_L5N421
UniRef90_I3EAR3 : MHRLSDELLIESYYKALELNLSQDFIRLIEKEIKRRSLSHKI : UniRef90_I3EAR3
UniRef90_K6DTT5 : MRTLSDELLLESFYKAIELNLSPDFIQLIKKEIERRSLHTKI : UniRef90_K6DTT5
UniRef90_M1Z404 : MRELSDESLIEVYRKAVQYHLDKEFIDLILEEMIRRKL---- : UniRef90_M1Z404
UniRef90_N0AWJ6 : MKKLTDDLLIEAYYKARELKLNPDFIRLIEKELQRRALFLKI : UniRef90_N0AWJ6
UniRef90_X0RB51 : MQNLSDELLIETFYKAVELELNPDFIELIKSEIHKRSLHDKI : UniRef90_X0RB51
UniRef90_I8UEB6 : MENLSDELLIESYYKAKELQLSTDFIFLIQREIERRALQNRL : UniRef90_I8UEB6
UniRef90_K0J3Q9 : MDKLTNELLLECYEKAVELNLDEAFIRLIEQEIYSRSLTHMI : UniRef90_K0J3Q9
UniRef90_A0A015LXZ4 : MEILSDDMLLESYYTAVQLKLDPAFIRLLATEMQRRNL---- : UniRef90_A0A015LXZ4
UniRef90_D5DMR5 : MRKLSDELLIESYSKATELQLSPDFIKLIEEEIERRSL---- : UniRef90_D5DMR5
UniRef90_Q9KD96 : MKTLSDDLLIETYHKAIELDLGDDFIGLIKEEIERRSLTEKL : UniRef90_Q9KD96
UniRef90_U4WPN2 : MRYLSDTMLIEVYQRAVALHLDADFIFLVEAEMARRKLS--- : UniRef90_U4WPN2
UniRef90_L0EGN8 : MNKLPDELLLEAYYTAVEQKLDPAFIRMLAAELSRRKL---- : UniRef90_L0EGN8
UniRef90_Q5WIV5 : MKTLSDNILIEACKNAIKLNLDPDFIHLLLKECQRRNIS--- : UniRef90_Q5WIV5
UniRef90_G9QPY6 : MRLLSDELLIETYYKAIELKLSPEFIRLIETEMDRRALN--- : UniRef90_G9QPY6
UniRef90_E6TW06 : MRYLSDDLLMETYRKARELQLSEDFITLIRQEIERRSRKDK- : UniRef90_E6TW06
UniRef90_B5V681 : MEQLSTELLTESYYKAKELKLNPDFILLIKQEIIRRSLEDKL : UniRef90_B5V681
UniRef90_W4F729 : MSKLSDDLLIKAYVTATTSMLNPEFIYLLKIEIMRRSLIKKV : UniRef90_W4F729
UniRef90_N4WTE5 : MENLPDELLIESYKKANELDLSYEFIHLMEEELKRRSLTD-- : UniRef90_N4WTE5
UniRef90_Q9K7P9 : MDNIHDDVLIEAYVRAKELNLKQDFIELLMNEMVRRCL---- : UniRef90_Q9K7P9
UniRef90_UPI00035DC727 : MWMLTDDELLHAYQQAVELQLDHHFIQLLQEEINRRQL---- : UniRef90_UPI00035DC727
UniRef90_UPI000288CE88 : MENLSDSLLIESYEKALKYHLSTAFIGLIRQEMKRRRI---- : UniRef90_UPI000288CE88
UniRef90_W8Z082 : MELLSDELLIETYFSAVQFNLDYDFIKLLKGELKRRQLS--- : UniRef90_W8Z082
UniRef90_X0REH8 : MHSLSNDLLIQSYIQAKELNLSTDFIELLIEEMTRRNIS--- : UniRef90_X0REH8
UniRef90_E0IFS5 : MELLSDDLLVDTYFAAIQLHLDQEFIRLISEEIMRRQIN--- : UniRef90_E0IFS5
UniRef90_U1X3S6 : MHLLSDEALLDAYVKATHLGLEQEFIALLMEEINKRDLH--- : UniRef90_U1X3S6
UniRef90_UPI0003792499 : MKYLSDALLLEVYQRAKELQLEQAFIELLYSEMQDRNL---- : UniRef90_UPI0003792499
UniRef90_E6TUS7 : MKKLNDESLIEAYIKSMEINVSQHFIDLLEEELKERGLFDKV : UniRef90_E6TUS7
UniRef90_S9TBE7 : MALLSDELLIDSYEQAIRLRLDEEFIALLLEEMKRRCL---- : UniRef90_S9TBE7
UniRef90_C6J0V4 : MALLTDELLLESYQKATELQLDREFIALLLAEIRKREL---- : UniRef90_C6J0V4
UniRef90_W4CKB5 : MAMLSDEMLLDSYHKAIELNLERDFIALLLAEIHKRKLG--- : UniRef90_W4CKB5
UniRef90_UPI00036F26E0 : MSNLSSELLLKSFFKATELKLSPDFIFLLETEIHRR------ : UniRef90_UPI00036F26E0
UniRef90_I0JP72 : IKQLSDSLLIQSYHKAIELNLSEDFILQMREELIARSIN--- : UniRef90_I0JP72
UniRef90_V6MCH0 : MKYMSDQMLIEVYHRAIDLQLDAAFIELLSLELKHRNIS--- : UniRef90_V6MCH0
UniRef90_UPI000289922B : MTLLNDDILVETYQKAVELNLDREFISLLLAEINRRKL---- : UniRef90_UPI000289922B
UniRef90_Q9KDA9 : METLSDTFLMEACKYAIKLNLDPDFIHILIEECERRSL---- : UniRef90_Q9KDA9
UniRef90_H3SDF5 : MALLSDELLMDSYEQAIKLGLDDDFIALLLAEIQKRRLH--- : UniRef90_H3SDF5
UniRef90_W4EG96 : MVELSDEMLLDSYHRAIELHLEHDFIALLLAEIRKRNLH--- : UniRef90_W4EG96
UniRef90_W2E894 : MRVISDETLLESYWKALDLQLDVDFVNLLLMEIKRRDLS--- : UniRef90_W2E894
UniRef90_U6SPI1 : IKFLSDTTLLESYRKAIELGLDDDFVNLLKEELARRNL---- : UniRef90_U6SPI1
UniRef90_U1WXM6 : LSLLSDEELIKIYTQAMSLELDDDFIELIKAELVRRGI---- : UniRef90_U1WXM6
UniRef90_F5LQP6 : MRQISDETLVESYFKALDLELESEFVDLLLGEINRRHI---- : UniRef90_F5LQP6
UniRef90_M5QUE1 : MHYINDKLLIESYKTAVKLKLNKGFIQILLSEIKRRKL---- : UniRef90_M5QUE1
UniRef90_F8FHH0 : MKLISNEILVDSYFKAISLKLEDEFVELLLEEIQRREI---- : UniRef90_F8FHH0
UniRef90_UPI0003677CEB : LRPLNDEHLLEVYREAKKMNLSAEFIELLEDAIELRRLEHRL : UniRef90_UPI0003677CEB
UniRef90_W7ZEF4 : IENIENDVLLEAYHKAIEKQLDDDFILILKSELIRR------ : UniRef90_W7ZEF4
UniRef90_L0EIL2 : LRPLTDEHLLEVYHEAVAMGLSAEFIQLIEEAIRSRNLDPK- : UniRef90_L0EIL2
UniRef90_UPI00047178B7 : MENLVDELLLTSYDKAIKLNLEREFILILEKEIKRRGL---- : UniRef90_UPI00047178B7
UniRef90_A0A024PMR5 : MEFLSDKQLADAYQKAFELNLDKDFLHLLQGEINKRK----- : UniRef90_A0A024PMR5
UniRef90_D3EHJ0 : --MLTDEMLLDSYHMAVELKLEREFITLLLAEIHKRNL---- : UniRef90_D3EHJ0
: 1---------11--------21--------31--------41 :
OrigSeq : MKHLSDELLIESYFKAKELNLSPEFIELIEKEIQRRSLTHKI : OrigSeq
Jnet : -----HHHHHHHHHHHHH----HHHHHHHHHHHHHH------ : Jnet
jhmm : -----HHHHHHHHHHHHHH---HHHHHHHHHHHHH------- : jhmm
jpssm : -----HHHHHHHHHHHHH----HHHHHHHHHHHHHHH----- : jpssm
Lupas 14 : ------------------------------------------ : Lupas 14
Lupas 21 : ------------------------------------------ : Lupas 21
Lupas 28 : ------------------------------------------ : Lupas 28
Jnet_25 : ---B---BBB-BB--BB-B-B---BB-BB--BB--B-B---- : Jnet_25
Jnet_5 : --------BB-BB--B--------BB--B---B--------- : Jnet_5
Jnet_0 : --------B--B---B--------B---B------------- : Jnet_0
Jnet Rel : 999727999999999874088668999999999982258999 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.