SILENT_MODE BLOCK_FILE jp_851s9iG.concise.blc MAX_NSEQ 896 MAX_INPUT_LEN 898 OUTPUT_FILE jp_851s9iG.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 139 885 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 886 139 895 H SPACE SUB_CHARS 1 886 139 895 E SPACE SUB_CHARS 1 886 139 895 - SPACE HELIX 6 889 22 COLOUR_TEXT_REGION 6 889 22 889 50 HELIX 27 889 36 COLOUR_TEXT_REGION 27 889 36 889 50 HELIX 43 889 70 COLOUR_TEXT_REGION 43 889 70 889 50 HELIX 79 889 94 COLOUR_TEXT_REGION 79 889 94 889 50 HELIX 102 889 113 COLOUR_TEXT_REGION 102 889 113 889 50 HELIX 123 889 135 COLOUR_TEXT_REGION 123 889 135 889 50 HELIX 6 894 22 COLOUR_TEXT_REGION 6 894 22 894 50 HELIX 27 894 36 COLOUR_TEXT_REGION 27 894 36 894 50 HELIX 43 894 70 COLOUR_TEXT_REGION 43 894 70 894 50 HELIX 79 894 94 COLOUR_TEXT_REGION 79 894 94 894 50 HELIX 102 894 113 COLOUR_TEXT_REGION 102 894 113 894 50 HELIX 123 894 134 COLOUR_TEXT_REGION 123 894 134 894 50 HELIX 6 895 21 COLOUR_TEXT_REGION 6 895 21 895 50 HELIX 27 895 36 COLOUR_TEXT_REGION 27 895 36 895 50 HELIX 43 895 70 COLOUR_TEXT_REGION 43 895 70 895 50 HELIX 79 895 93 COLOUR_TEXT_REGION 79 895 93 895 50 HELIX 102 895 113 COLOUR_TEXT_REGION 102 895 113 895 50 HELIX 122 895 135 COLOUR_TEXT_REGION 122 895 135 895 50