SILENT_MODE
BLOCK_FILE jp_4bzejft.concise.blc
MAX_NSEQ 528
MAX_INPUT_LEN 530
OUTPUT_FILE jp_4bzejft.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 80 517   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 518 80 527 H SPACE
SUB_CHARS 1 518 80 527 E SPACE
SUB_CHARS 1 518 80 527 - SPACE
STRAND 2 521 7
COLOUR_TEXT_REGION 2 521 7 521 51
STRAND 45 521 50
COLOUR_TEXT_REGION 45 521 50 521 51
STRAND 73 521 77
COLOUR_TEXT_REGION 73 521 77 521 51
HELIX 14 521 24
COLOUR_TEXT_REGION 14 521 24 521 50
HELIX 29 521 40
COLOUR_TEXT_REGION 29 521 40 521 50
HELIX 52 521 68
COLOUR_TEXT_REGION 52 521 68 521 50
STRAND 2 526 7
COLOUR_TEXT_REGION 2 526 7 526 51
STRAND 45 526 50
COLOUR_TEXT_REGION 45 526 50 526 51
STRAND 73 526 78
COLOUR_TEXT_REGION 73 526 78 526 51
HELIX 14 526 24
COLOUR_TEXT_REGION 14 526 24 526 50
HELIX 29 526 41
COLOUR_TEXT_REGION 29 526 41 526 50
HELIX 52 526 68
COLOUR_TEXT_REGION 52 526 68 526 50
STRAND 2 527 7
COLOUR_TEXT_REGION 2 527 7 527 51
STRAND 44 527 49
COLOUR_TEXT_REGION 44 527 49 527 51
STRAND 74 527 77
COLOUR_TEXT_REGION 74 527 77 527 51
HELIX 14 527 24
COLOUR_TEXT_REGION 14 527 24 527 50
HELIX 30 527 39
COLOUR_TEXT_REGION 30 527 39 527 50
HELIX 52 527 68
COLOUR_TEXT_REGION 52 527 68 527 50