SILENT_MODE BLOCK_FILE jp_96M1XZT.concise.blc MAX_NSEQ 237 MAX_INPUT_LEN 239 OUTPUT_FILE jp_96M1XZT.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 120 226 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 227 120 236 H SPACE SUB_CHARS 1 227 120 236 E SPACE SUB_CHARS 1 227 120 236 - SPACE STRAND 58 230 62 COLOUR_TEXT_REGION 58 230 62 230 51 STRAND 93 230 97 COLOUR_TEXT_REGION 93 230 97 230 51 STRAND 101 230 106 COLOUR_TEXT_REGION 101 230 106 230 51 STRAND 112 230 116 COLOUR_TEXT_REGION 112 230 116 230 51 HELIX 3 230 19 COLOUR_TEXT_REGION 3 230 19 230 50 HELIX 25 230 43 COLOUR_TEXT_REGION 25 230 43 230 50 HELIX 69 230 77 COLOUR_TEXT_REGION 69 230 77 230 50 HELIX 82 230 88 COLOUR_TEXT_REGION 82 230 88 230 50 STRAND 58 235 62 COLOUR_TEXT_REGION 58 235 62 235 51 STRAND 93 235 97 COLOUR_TEXT_REGION 93 235 97 235 51 STRAND 101 235 106 COLOUR_TEXT_REGION 101 235 106 235 51 STRAND 112 235 116 COLOUR_TEXT_REGION 112 235 116 235 51 HELIX 2 235 19 COLOUR_TEXT_REGION 2 235 19 235 50 HELIX 25 235 43 COLOUR_TEXT_REGION 25 235 43 235 50 HELIX 69 235 77 COLOUR_TEXT_REGION 69 235 77 235 50 HELIX 82 235 88 COLOUR_TEXT_REGION 82 235 88 235 50 STRAND 59 236 62 COLOUR_TEXT_REGION 59 236 62 236 51 STRAND 93 236 97 COLOUR_TEXT_REGION 93 236 97 236 51 STRAND 101 236 105 COLOUR_TEXT_REGION 101 236 105 236 51 STRAND 113 236 117 COLOUR_TEXT_REGION 113 236 117 236 51 HELIX 3 236 19 COLOUR_TEXT_REGION 3 236 19 236 50 HELIX 25 236 43 COLOUR_TEXT_REGION 25 236 43 236 50 HELIX 69 236 77 COLOUR_TEXT_REGION 69 236 77 236 50 HELIX 82 236 88 COLOUR_TEXT_REGION 82 236 88 236 50