QUERY : DIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNFKGKKLDVFGISYNGQCNTKYIYGGVTATN : QUERY
UniRef90_Y8RZC2 : DVGVINLRNFYTNYQPETLQGVSSGNFSTSHQLEYIDGKYTLYSQFHNEYEAKRLKDHKVDIFGISYSGLCNTKYMYGGITLAN : UniRef90_Y8RZC2
UniRef90_Q007A6 : DIGVGNLRNFYTKHDYIDLKGVTDKNLPIANQLEFSTGTNDLISESNNWDEISKFKGKKLDIFGIDYNGPCKSKYMFGGATLS- : UniRef90_Q007A6
UniRef90_D2JDI2 : DAGVLNLRNFYGSYSFEDHKSIDTLNNPLTHELTFNMGNYQLNSEMQNDFDVAKFKGKKVDIFGISYKGVCGTNYMYGGVTKSD : UniRef90_D2JDI2
UniRef90_Q9F0L7 : DVGPGNLRNFYTKYEYVNLKNVKDKNSPESHRLEYSYKNDTLYAEFDNEYITSDLKGKNVDVFGISYKYGSNSRTIYGGVTKAE : UniRef90_Q9F0L7
UniRef90_A0A033C0U2 : DVGVQNLRNYYGSYEFTDLKNQSDKNNPQSHQLEYEVEGKALYSQLSSEHDVKRLKSKKVDIFGIPYTGITNVEYIYGGITLSN : UniRef90_A0A033C0U2
UniRef90_Y8CZJ9 : DVGVLNLRNYYGSYPIEDHQSINPENNHLSHQLVFSMDNSTVTAEFKNVDDVKKFKNHAVDVYGLSYSGYCKNKYI-------- : UniRef90_Y8CZJ9
UniRef90_Q1CQP3 : -VGVINLRNLYSTYDPTEVKGKINEGPPFSGSLPYGNSSIELKVELNSVEKANFFSGKRVDIFTLEYSPPCNSKNSYGGITLSD : UniRef90_Q1CQP3
UniRef90_Q5XCI7 : ---VKNLQNIYFLYDPVVHENVKSVDQLLSHDLIYNVSNYDLKTELKNREMSTLFKNKNVDIYGVEYYYHCRRACIYGGVT--- : UniRef90_Q5XCI7
UniRef90_D2J7F2 : -----NMRNYFHRWPPVKGENKITNDQFLANTLLFKDYYNDLLVQFNSKETTDKFKAKTVDIYGLAYGFQCNTNCIYGGLT--- : UniRef90_D2J7F2
UniRef90_P0DJY7 : ---------FFMRVTLVTHENVKSVDQLLSHDLIYNVSNYDLKTELKNQEMATLFKDKNVDIYGVEYYHLCRSACLYGGVT--- : UniRef90_P0DJY7
UniRef90_D2JDI1 : -----NLSNFYKSAEWTDIHNKVNKNQLLATDLIFGDMTNALKVEFQNSALASQFKDKKVDIYGISFANNCKTSCMYGGITIHD : UniRef90_D2JDI1
UniRef90_D2J8S9 : ------LYNIKTSYSILDIKNKTNSTQLLSNDLIFDDNKNSLKTEFNSSEIANHFKGKKVDIFGIYYGANCRTGCIYGGITL-- : UniRef90_D2J8S9
UniRef90_L9U0F7 : DVGTGNLRNFYTKYEYVNLKNVKDKNSPESHRLEYSYKNDTLYAEFDNEYITSDLKGK-------------------------- : UniRef90_L9U0F7
UniRef90_H3YEU6 : ---------------PTQLENKKTNDRLLKHDLLFHDMKKDFKVEFENEALSKKFVNKDIDIFAGNYGYGCKTLCSYGGVTLSD : UniRef90_H3YEU6
UniRef90_N6J8H3 : ----GNVMNLYTS-PPVEGRGVINSRQFLSHDLIFPISYNEVKTELENTELANNYKDKKVDIFGVPYFYTC------------- : UniRef90_N6J8H3
UniRef90_Q06B22 : --------------PPVEGRGVINSRQFLSHDLIFPISYNEVKTELENTELANNYKDKKVDIFGVPYFYTCKSECMYGALT--- : UniRef90_Q06B22
UniRef90_P0A0L2 : ----GNLKQIYYYNEKAKTENKESHDQFLQHTILFHSWYNDLLVDFDSKDIVDKYKGKKVDLYGAYYGYQCKTACMYGGVTLHD : UniRef90_P0A0L2
UniRef90_D8HI02 : -VALDNLRQIYYHNGKAITENKESDNQFLQHTILFNGFYNDLLVDFDSKVLADKYKGKKVDLYGAYYGYQCKTACMYGGVTLHD : UniRef90_D8HI02
UniRef90_A0A020UUT5 : -----------------------------------------MISESNNWDEISKFKGKKLDIFGIDYNGPCKSKYMYGGATLS- : UniRef90_A0A020UUT5
UniRef90_UPI0003766592 : ---------FIQKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNFKGKNL------------------------ : UniRef90_UPI0003766592
UniRef90_Y7RGT3 : ----GNVESLYKDKA-VIAENVKNTRQFLGHDLIFPIEYKEVKSEFINKKTADKFKDKRLDVFGIPYFYTCDGVCIYGGVTM-- : UniRef90_Y7RGT3
UniRef90_A0A020PID2 : -------------------EKIMTEDQFLDYTLLFHSQYNDLLVQFDSKETVNKFKGKQVDLYGSYYGFQCKTACMYGGVTL-- : UniRef90_A0A020PID2
UniRef90_F7IVC7 : ----GNLRCLYDNH-FVEGTNVRSTGQLLQHDLIFKLKNYDVKTEFNSKDLAAKYKNKDVDIFGSNYGNSCKNACMYGGVT--- : UniRef90_F7IVC7
UniRef90_E9NQE8 : --------------------NKESHDQFLQHTILFHSWYNDLLVDFDSKDIVDKYKGKKVDLYGAYYGYQCKTACMYGGVTLHD : UniRef90_E9NQE8
UniRef90_D2J5W7 : -----NMKHSYADKNPIIGENKSTGDQFLENTLLYKINFEDLLINFNSKEMAQHFKSKNVDVYAIRYSINCRTACTYGGVT--- : UniRef90_D2J5W7
UniRef90_G7ZPL3 : -----NLTSYYTDITWLEKSNVISSDQLLNNTIIFKNNTSSLKVEFNSLDLANQYKGSNVDIFGLYYGNKCKTSCLYGGVTIHD : UniRef90_G7ZPL3
UniRef90_UPI0002E246C3 : -----NMKFLYEGHSI-SVQNVKSVDSFLGHDLIFSQNQEQVKTELINKKLAEKYKNQRVDIFGTNYYANCGKTCMYGGLT--- : UniRef90_UPI0002E246C3
UniRef90_R9D1P3 : ------LANAYGQYPFIK-ENVISSEIIGEKDLIFGDNGNDLRVKFASAGLAQNFKNKNVDIYGASFYYKCESECLYGGTTLNN : UniRef90_R9D1P3
UniRef90_Y0PU56 : ---------------------IRTLSQLLNNTIILKNKTSSLKVEFNSSDLANQFKGKNIDIYGLYFGNKCKTSCLYGGVTIHD : UniRef90_Y0PU56
UniRef90_A0A019B686 : ------------------------NDFFTGHQW-----YNDLLVDLGSKDTANIYKGKKVDLYGVYYGYQCKTACMYGGVTLHD : UniRef90_A0A019B686
UniRef90_G8I0Y7 : ----GNMKYLYDDH-YVSATKVKSVDKFLAHDLIYNISNYDVKTELLNEDLAKKYKDEVVDVYGSNYYVNCGKTCMYGGITK-- : UniRef90_G8I0Y7
UniRef90_A0A034H1W8 : -------------------------------------MEKDFKVEFENEALSKKFINKDIDIFAGNYGYGCKTQCSYGGVTFSD : UniRef90_A0A034H1W8
UniRef90_Q6YCN4 : ----DNMRYLYDDKHVSEI-NIKAQEKFLQHDLLFKDGSKILKTEFNNNSLSDKYKNKNIDLFGTNYYYQCEKTCMYGGVTEHD : UniRef90_Q6YCN4
UniRef90_A0A012D6A6 : ----DNMRYLYDDKH-VSETNIKSQEKFLQHDLLFKNGSKILKTEFNNKSLSDKYKNKNVDLFGTNYYNQC------------- : UniRef90_A0A012D6A6
UniRef90_A0A021NP52 : -----NINDDYINNRFTTVKSVSTTEKFLDFDLLFKSINKDLKVEFSSSAISKEFLGKTVDIYGVYYKAHCDTACTYGGVT--- : UniRef90_A0A021NP52
UniRef90_D0K663 : -----------------------------------------MKVEFNSSDLANQFKGKNIDIYGLYFGNKCKTSCLYGGVTIHD : UniRef90_D0K663
UniRef90_V5YRW3 : --------------DPVNAKKIKLSDKFLSHDFIVPINNYDVKTELKDSTMASSFDGKEVDIFGVNYFDQCKKTCMYGGITL-- : UniRef90_V5YRW3
UniRef90_D2FJ38 : --------------------NVKSIDQFLYFDLIYSIGNYDVRVEFKNKDLADKYKDKYVDVFGANYYYQCRKTCMYGGVTEHN : UniRef90_D2FJ38
UniRef90_E8SDQ3 : ----GNVKYLYDR-NFISESNVKSIDSLLAHDLIFCIRESEVKTEFASKELAQKYRNKQVDIFGANYYVDCGKTCMYGGVT--- : UniRef90_E8SDQ3
UniRef90_Y6EGV6 : -------------------------------------EYKEVKSEFINKKTADKFKDKRLDVFGIPYFYTCDGVCIYGGVTM-- : UniRef90_Y6EGV6
UniRef90_H3RWD0 : --------------------NVKSIDQFLYFDLIYSIGNYDVRVEFKNKDLADKYKDKYVDVFGANYYYQC------------- : UniRef90_H3RWD0
UniRef90_Q6XZE7 : ---------------------VKSVDKFLAHDLIYNISDKKLKTELLNEDLAKKYKDEVVDVYGSNYYVNCGKTCMYGGITK-- : UniRef90_Q6XZE7
UniRef90_U2TPG8 : ---VKNLQNIYFLYDPVVHENVKSVDQLLSHDLIYNVSNYD------------------------------------------- : UniRef90_U2TPG8
UniRef90_E5QT80 : DIALHNIDKDYMTNRFTINESVLTTEKFLDIDLLFKNEFKDLKVEFSSSEISKEYFGKTVDIYGVYYKAHCKTACTYGGVT--- : UniRef90_E5QT80
UniRef90_A0A033BZW7 : -----NMKALYES-DPVSFEKIKSYDQFLSFDLIYFYQTNRIKTELTN-DLSNYYKDKDVDLFGVKYFVNCDRVCMYGGVT--- : UniRef90_A0A033BZW7
UniRef90_S5TQU4 : -----NLETLYKQDSLINKESVKSTDVVTTHMLKYKVDGKDLSVFLLNEWTTEQFKNKEVDIYALSAPDICKRYNVYGGLTVAN : UniRef90_S5TQU4
UniRef90_R9YNB1 : -----NLTSYYTDITWLDESNKISTDQLLNNTIILKNKTSSLKVEFNSSDLANQFKGKNIDI---------------------- : UniRef90_R9YNB1
: 1---------11--------21--------31--------41--------51--------61--------71--------81-- :
OrigSeq : DIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNFKGKKLDVFGISYNGQCNTKYIYGGVTATN : OrigSeq
Jnet : ----HHHHH-------EEEE----------EEEEEE----EEEEEE--HHHHH------EEEEEEE-------EEEEEEEE--- : Jnet
jhmm : ----HHHHH-------EEEEE---------EEEEEE----EEEEEE--HHHHH------EEEEEEE-------EEEEEEEE--- : jhmm
jpssm : -----HHH--------EEEE-----------EEEE-----EEEEE---HHHHH-----EEEEEEEE-------EEEEE-E---- : jpssm
Lupas 14 : ------------------------------------------------------------------------------------ : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------------ : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------------ : Lupas 28
Jnet_25 : --B--BB--BB--B-BB-B--B------B-B-B-B-B----BBB-B-----B--B----BBBBBB-B-B-B---BBBBBBB--- : Jnet_25
Jnet_5 : ------B-------------------------B--------B-B---------------B-BBBB----------BBBBB---- : Jnet_5
Jnet_0 : ------B----------------------------------B---------------------B-------------BB----- : Jnet_0
Jnet Rel : 998522211467877335430677776545157620788458874074455533788627888886378887416772422699 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.