SILENT_MODE
BLOCK_FILE jp_xOJ7UUR.concise.blc
MAX_NSEQ 72
MAX_INPUT_LEN 74
OUTPUT_FILE jp_xOJ7UUR.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 131 61   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 62 131 71 H SPACE
SUB_CHARS 1 62 131 71 E SPACE
SUB_CHARS 1 62 131 71 - SPACE
STRAND 8 65 16
COLOUR_TEXT_REGION 8 65 16 65 51
STRAND 25 65 29
COLOUR_TEXT_REGION 25 65 29 65 51
STRAND 35 65 39
COLOUR_TEXT_REGION 35 65 39 65 51
STRAND 75 65 84
COLOUR_TEXT_REGION 75 65 84 65 51
STRAND 89 65 94
COLOUR_TEXT_REGION 89 65 94 65 51
STRAND 121 65 128
COLOUR_TEXT_REGION 121 65 128 65 51
HELIX 40 65 49
COLOUR_TEXT_REGION 40 65 49 65 50
HELIX 104 65 110
COLOUR_TEXT_REGION 104 65 110 65 50
STRAND 8 70 16
COLOUR_TEXT_REGION 8 70 16 70 51
STRAND 26 70 29
COLOUR_TEXT_REGION 26 70 29 70 51
STRAND 34 70 39
COLOUR_TEXT_REGION 34 70 39 70 51
STRAND 75 70 84
COLOUR_TEXT_REGION 75 70 84 70 51
STRAND 89 70 93
COLOUR_TEXT_REGION 89 70 93 70 51
STRAND 121 70 128
COLOUR_TEXT_REGION 121 70 128 70 51
HELIX 40 70 52
COLOUR_TEXT_REGION 40 70 52 70 50
HELIX 104 70 110
COLOUR_TEXT_REGION 104 70 110 70 50
STRAND 8 71 15
COLOUR_TEXT_REGION 8 71 15 71 51
STRAND 25 71 29
COLOUR_TEXT_REGION 25 71 29 71 51
STRAND 35 71 39
COLOUR_TEXT_REGION 35 71 39 71 51
STRAND 76 71 84
COLOUR_TEXT_REGION 76 71 84 71 51
STRAND 89 71 95
COLOUR_TEXT_REGION 89 71 95 71 51
STRAND 121 71 128
COLOUR_TEXT_REGION 121 71 128 71 51
HELIX 40 71 48
COLOUR_TEXT_REGION 40 71 48 71 50
HELIX 103 71 110
COLOUR_TEXT_REGION 103 71 110 71 50