SILENT_MODE BLOCK_FILE jp_I6jWUfB.concise.blc MAX_NSEQ 976 MAX_INPUT_LEN 978 OUTPUT_FILE jp_I6jWUfB.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 196 965 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 966 196 975 H SPACE SUB_CHARS 1 966 196 975 E SPACE SUB_CHARS 1 966 196 975 - SPACE STRAND 11 969 15 COLOUR_TEXT_REGION 11 969 15 969 51 STRAND 36 969 38 COLOUR_TEXT_REGION 36 969 38 969 51 STRAND 57 969 61 COLOUR_TEXT_REGION 57 969 61 969 51 STRAND 82 969 86 COLOUR_TEXT_REGION 82 969 86 969 51 STRAND 92 969 97 COLOUR_TEXT_REGION 92 969 97 969 51 STRAND 119 969 121 COLOUR_TEXT_REGION 119 969 121 969 51 STRAND 155 969 158 COLOUR_TEXT_REGION 155 969 158 969 51 STRAND 170 969 172 COLOUR_TEXT_REGION 170 969 172 969 51 STRAND 176 969 179 COLOUR_TEXT_REGION 176 969 179 969 51 STRAND 190 969 194 COLOUR_TEXT_REGION 190 969 194 969 51 HELIX 3 969 6 COLOUR_TEXT_REGION 3 969 6 969 50 HELIX 17 969 29 COLOUR_TEXT_REGION 17 969 29 969 50 HELIX 43 969 52 COLOUR_TEXT_REGION 43 969 52 969 50 HELIX 64 969 72 COLOUR_TEXT_REGION 64 969 72 969 50 HELIX 103 969 114 COLOUR_TEXT_REGION 103 969 114 969 50 HELIX 125 969 131 COLOUR_TEXT_REGION 125 969 131 969 50 HELIX 140 969 150 COLOUR_TEXT_REGION 140 969 150 969 50 STRAND 11 974 15 COLOUR_TEXT_REGION 11 974 15 974 51 STRAND 36 974 38 COLOUR_TEXT_REGION 36 974 38 974 51 STRAND 57 974 61 COLOUR_TEXT_REGION 57 974 61 974 51 STRAND 83 974 86 COLOUR_TEXT_REGION 83 974 86 974 51 STRAND 92 974 97 COLOUR_TEXT_REGION 92 974 97 974 51 STRAND 119 974 121 COLOUR_TEXT_REGION 119 974 121 974 51 STRAND 155 974 158 COLOUR_TEXT_REGION 155 974 158 974 51 STRAND 170 974 171 COLOUR_TEXT_REGION 170 974 171 974 51 STRAND 176 974 179 COLOUR_TEXT_REGION 176 974 179 974 51 STRAND 190 974 194 COLOUR_TEXT_REGION 190 974 194 974 51 HELIX 3 974 6 COLOUR_TEXT_REGION 3 974 6 974 50 HELIX 17 974 29 COLOUR_TEXT_REGION 17 974 29 974 50 HELIX 43 974 52 COLOUR_TEXT_REGION 43 974 52 974 50 HELIX 63 974 71 COLOUR_TEXT_REGION 63 974 71 974 50 HELIX 103 974 114 COLOUR_TEXT_REGION 103 974 114 974 50 HELIX 125 974 131 COLOUR_TEXT_REGION 125 974 131 974 50 HELIX 139 974 150 COLOUR_TEXT_REGION 139 974 150 974 50 STRAND 11 975 15 COLOUR_TEXT_REGION 11 975 15 975 51 STRAND 37 975 38 COLOUR_TEXT_REGION 37 975 38 975 51 STRAND 57 975 61 COLOUR_TEXT_REGION 57 975 61 975 51 STRAND 82 975 86 COLOUR_TEXT_REGION 82 975 86 975 51 STRAND 92 975 97 COLOUR_TEXT_REGION 92 975 97 975 51 STRAND 118 975 120 COLOUR_TEXT_REGION 118 975 120 975 51 STRAND 136 975 136 COLOUR_TEXT_REGION 136 975 136 975 51 STRAND 155 975 158 COLOUR_TEXT_REGION 155 975 158 975 51 STRAND 171 975 172 COLOUR_TEXT_REGION 171 975 172 975 51 STRAND 175 975 179 COLOUR_TEXT_REGION 175 975 179 975 51 STRAND 190 975 193 COLOUR_TEXT_REGION 190 975 193 975 51 HELIX 2 975 6 COLOUR_TEXT_REGION 2 975 6 975 50 HELIX 19 975 29 COLOUR_TEXT_REGION 19 975 29 975 50 HELIX 44 975 52 COLOUR_TEXT_REGION 44 975 52 975 50 HELIX 64 975 74 COLOUR_TEXT_REGION 64 975 74 975 50 HELIX 103 975 113 COLOUR_TEXT_REGION 103 975 113 975 50 HELIX 125 975 131 COLOUR_TEXT_REGION 125 975 131 975 50 HELIX 142 975 150 COLOUR_TEXT_REGION 142 975 150 975 50