SILENT_MODE
BLOCK_FILE jp_6PjLg91.concise.blc
MAX_NSEQ 55
MAX_INPUT_LEN 57
OUTPUT_FILE jp_6PjLg91.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 84 44   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 45 84 54 H SPACE
SUB_CHARS 1 45 84 54 E SPACE
SUB_CHARS 1 45 84 54 - SPACE
STRAND 3 48 9
COLOUR_TEXT_REGION 3 48 9 48 51
STRAND 15 48 21
COLOUR_TEXT_REGION 15 48 21 48 51
STRAND 73 48 79
COLOUR_TEXT_REGION 73 48 79 48 51
HELIX 29 48 34
COLOUR_TEXT_REGION 29 48 34 48 50
HELIX 49 48 49
COLOUR_TEXT_REGION 49 48 49 48 50
HELIX 52 48 59
COLOUR_TEXT_REGION 52 48 59 48 50
STRAND 3 53 9
COLOUR_TEXT_REGION 3 53 9 53 51
STRAND 15 53 22
COLOUR_TEXT_REGION 15 53 22 53 51
STRAND 66 53 67
COLOUR_TEXT_REGION 66 53 67 53 51
STRAND 73 53 79
COLOUR_TEXT_REGION 73 53 79 53 51
HELIX 29 53 34
COLOUR_TEXT_REGION 29 53 34 53 50
HELIX 52 53 58
COLOUR_TEXT_REGION 52 53 58 53 50
STRAND 4 54 9
COLOUR_TEXT_REGION 4 54 9 54 51
STRAND 15 54 20
COLOUR_TEXT_REGION 15 54 20 54 51
STRAND 72 54 79
COLOUR_TEXT_REGION 72 54 79 54 51
HELIX 29 54 34
COLOUR_TEXT_REGION 29 54 34 54 50
HELIX 48 54 50
COLOUR_TEXT_REGION 48 54 50 54 50
HELIX 54 54 61
COLOUR_TEXT_REGION 54 54 61 54 50