QUERY : GLKLDLTWFDKSTEDFKGEEYSKDFGDDGSVMESLGVPFKDNVNNGCFDVIAEWVPLLQPYFNHQIDISDNEYFVSFDYRDGDW : QUERY
UniRef90_P02986 : GLKLHIHWFDKKTEEFKGGEYSKDFGDDGSVIESLGMPLKDNINNGWFDVEKPWVSILQPHFKNVIDISKFDYFVSFVYRDGNW : UniRef90_P02986
UniRef90_W7KFF4 : GLKLRLTWFDKKTEEFKGEEYSKDFGDDGSVIESLGMPLKDNINNGEFDLKKEWVPLLQPFFKNQIKPDVDNCYIAFDYRDGNW : UniRef90_W7KFF4
UniRef90_J3GNZ5 : GLKIRLEWYDKKTEIGQGEELSKDFGDDGSVIEALGMPIENNINNGGFDVASNWVGTLQPHFHHVINLSSYDYQVAFIYRD-NW : UniRef90_J3GNZ5
UniRef90_Q5V9J9 : GLKLRLEWFNKQTDLLVGKEYSKDFGDDGSVIESLGIPLKDNINNGGFDLEESWIPLLQPHFKNKIETDKNLYQISFDYRD--- : UniRef90_Q5V9J9
UniRef90_H7EQ63 : GLRIRLNWYDKHNDLGVGREYSDDMGDDTSIIELLSLPISESVNNGEFDISIEWSTILQPYFKHKINLTEHDYQVAFDYRDA-- : UniRef90_H7EQ63
UniRef90_UPI0002E1884F : GLKLHLEWFDYKTEAFIGEEYTNDFGDDGSIIEYLGLPLEDNINNGGFDVTKEWVPLLQPHFKNKIEIDKYWYQISFDYRE--- : UniRef90_UPI0002E1884F
UniRef90_J3ICG6 : GLKVRLDWYDKETEIAAGKEYSADLGDDGSVINALGLMAESEIYDGGFDVLSAWVPKLQPLFKHKINIAAFDYQVAFRYR---- : UniRef90_J3ICG6
UniRef90_V6A5D6 : GLKLNLVWFEIDSRQFVGEEYSKDFGDDGSVIEGLGLPLEDNINNGGFNVERGWIPLLQPYFKTKISPEKFAYQISFDYQDGNW : UniRef90_V6A5D6
UniRef90_J2P401 : GLKVRLNWYDKKTELAEGKEYSVDLGDDGSIIESLGLLEENEIYDGGFDVRNDWIAKLQPLFTHKIEPAVFDYQVSFRYR-TTW : UniRef90_J2P401
UniRef90_A0A022PM09 : GLKLRLEWFDKQTELGEGCEYSKDFGDNADVMASLGISTEDNINNGGFDVESKWVSVLQPHFCHQIDLSAYDYQISFDYRD--- : UniRef90_A0A022PM09
UniRef90_C4SH23 : GLKLHLDWFDKKTELCKGEEYSVDLQTDGSVIEQLGLPLEDNINNGGFDIEDHWIPILQKYFSHHIDISKYDYQISFDYRD--- : UniRef90_C4SH23
UniRef90_I4KZI1 : GLKIRLDWYDKKTELGEGKEYSNDLGDDLSVITALDLESEPEIYDGGFDVRAEWIPIIQPFFEHSIAPEKFDYQIAFRYR-ANW : UniRef90_I4KZI1
UniRef90_J2V022 : GLKLRLEWYDKQTDLCEGEEYSKDLGDDEGVLNALGIPVENNINNGGFNVFEEWVPIIQPYFQHGIVFKTYDYQISFDYSD--- : UniRef90_J2V022
UniRef90_D3VLI6 : GIQLKLTWFDKKNEDFVGKEYSQDLGYDDSIIENCGLPLDDTLNNGVFDVLDAWVPVLQGNFNHQINFDKHFYQISFDYRMTD- : UniRef90_D3VLI6
UniRef90_A0A010RQD3 : GMKVRLEWYDKETEALAADEFSIDFGDDDSILAALGLSNEPEIFDGGFDVLPKWVAMIQPHFNHQIDTNLFDYQISFRYRN--- : UniRef90_A0A010RQD3
UniRef90_UPI000289140C : -MKVRLRWYDKHSNYVKADEYSADFDNAESFFETLGLGQETAIYADVFNVLPSWIAIIQPHFQHAIEPANFDYQISFSYQ-GTW : UniRef90_UPI000289140C
UniRef90_Y1DGA3 : GLKIRISWFDKKTEDFKGEEVSKDFGEDSSVMESLGLPMKDNLNNGEFDMDNGWVPFLQPHFQNRIDTSKFNYFVAFDYRD--- : UniRef90_Y1DGA3
UniRef90_J3E8H9 : GLRIRLHWFDEATDIEKGKEYSRDLGEDGSVMKALGLPIEETVNNGLFDVTQAWLPTLQPYFGHQIDLSTFNYQIGFSYRE--- : UniRef90_J3E8H9
UniRef90_I4L4H7 : GLKVRLEWFNRATERLCGTVNSADLGDDYTVISSLGLSTARDVNNGMFELRTEWLSMIQPYFSHEISLSESDYFIAFDYEVSN- : UniRef90_I4L4H7
UniRef90_J3ELC5 : GMKVRLNWYNKKTEIGEGREYSKDFGGNASIMDNLGIAPENNINNGGFDIGEDWAAVLQPYFVHTIDLSAYDYQVSFDYRD--- : UniRef90_J3ELC5
UniRef90_UPI0003710325 : GLKLRLTWFDKKTDEFIGEEYSKDFGDDDTLIGRLGLPEDDTMNNGEFAVAKGWVPLIQPYFKNQISSEKFDCFLAFNYRD--- : UniRef90_UPI0003710325
UniRef90_Q7MZD7 : GLKLNIAWFDKKTAEFIGEEYSGDLGDDGSVIEKLGLTIEDNINNGAFDVKKEWVPTLESCFKNKIETDKYWYKISFDYRD--- : UniRef90_Q7MZD7
UniRef90_V6MU50 : GLKIDLTWFDKKTESFIGEEYSVDLGDDDTIIEQTVNPTENIINAGSFDVISAWVPYLQKYIKHKIELNKYDYQVAFDYRD--- : UniRef90_V6MU50
UniRef90_UPI000363D79F : -MKIRLRWYEKHSDDLKADEYSADIVDADRSFEALGLSEESAIYADVYNVLPSWITILQPLFQHVIEPNRFDYQISFQYQ-GAW : UniRef90_UPI000363D79F
UniRef90_UPI000470AEB5 : GLKLRLQWFDKLTELGIGKEYSIDFGDDDSIMDGLGLSTKDIVNNGSFEIKSNWLMQLQPHFTHRINLSCYDYFISFDYRD--- : UniRef90_UPI000470AEB5
UniRef90_UPI000470C727 : GLKVRLEWFDRTTQQLRGAEDSADMGDDYSAISELGLSTAEDVNNGMFELRREWLPLIQARFSHEIALLESDYFIAFDYEDAN- : UniRef90_UPI000470C727
UniRef90_D4BWE5 : GLKIHLVWFDKQTEEYVGEEYSLDLGDNDSIIEETINPEENIINNGCFDMVSDWVSNLQNHIKHNIEFSKYDYQVSFDYRD--- : UniRef90_D4BWE5
UniRef90_S9Y0H0 : GLKIRLQWYDMRTELGESTEFSNNFGDNMEIITCLRIPTKNNVNNGFFDIEAEWIPILQPHFVHKITPTIYDYQVSFDYRD-NW : UniRef90_S9Y0H0
UniRef90_UPI0004663523 : GLKVRLRWFDKETEVLVGKEYSKDFDDDFIVLDDLDLSLENNINNGNFDVSTEWAEVLQPHFEHALDLSIYDYQLSFDYRD--- : UniRef90_UPI0004663523
UniRef90_UPI00036A7782 : -MKVRLEWFDKQTENLEADEYSANLDEDDDILKALDLHDEPQIYAGGFDVLPSWIAVLQPYFQRVIEPDLFDFQISFHYQ-GAW : UniRef90_UPI00036A7782
UniRef90_H2IYK3 : GLALKLEWFDKADELLVGKEVSVDLGNDGSLIKKFSLPFDGRIYDGGFDVLQAWRSDLQPFFQHRIDFSRYDYQLVFKRTD--- : UniRef90_H2IYK3
UniRef90_B4ETG4 : GLKLRIYWFNKKTKDFSGEEYSKDLGDDDFLIEETISPNENIINNGEFELKKEWINTIQKHVTHKIEPDKYTYFIAFDYQ---- : UniRef90_B4ETG4
UniRef90_UPI0004706C9E : --KIRLQWFNKQTSEGEGKEFSGVLDNNVYFLDKIGLSNEPQIYDGVYDVVVEWLPYIQPYFQHQLNLQRYDYQLAFR------ : UniRef90_UPI0004706C9E
UniRef90_UPI00046A394E : GLKLELYWCEKNGNDIIGKETSKDLGGNFDLVKALGFVPNEVINNGDFDVLNNWIEKVQPYFKSPIMLKEHDYLIAFTYRN--- : UniRef90_UPI00046A394E
UniRef90_I0QYF1 : --KMRLQWFNKENFDGEGKEFSAILDDNVYLLDKLGLSTEPRIYDGAYNISNEWLYYIQPYFQHQINLQQYDYQLAFRH----- : UniRef90_I0QYF1
UniRef90_UPI000471E75D : GLILILEWFDKSDEVLISKETSADLGQNGSIIKKFNLPFDGRIYDGGFDVLISWIDDLQPLFSHHIDFEKYDYQLVFKRTE--- : UniRef90_UPI000471E75D
UniRef90_M4K6U5 : -------------------EDSADLGDDYSVISELGLSVREDINNGMFELRPEWLSLIQTRFSHEIALSENDYFIAFDYENAN- : UniRef90_M4K6U5
UniRef90_W1HGV6 : GLKLHIHWFDKKTEEFKGGEYSKDFGDDGSVIESLGMPLKDNINNGCLMLKN-------------------------------- : UniRef90_W1HGV6
UniRef90_S5YPP5 : ------------------------------------MPLKDNINNGGFDVEKPWVPLLQPYFKNKIEVDKYWYQISFDYRDGNW : UniRef90_S5YPP5
UniRef90_Q3KDX9 : GLELRLEWYDTATLQFQGEESSRNLGDNESVLNALGIPVEGNINNGSFNVVE-------------------------------- : UniRef90_Q3KDX9
: 1---------11--------21--------31--------41--------51--------61--------71--------81-- :
OrigSeq : GLKLDLTWFDKSTEDFKGEEYSKDFGDDGSVMESLGVPFKDNVNNGCFDVIAEWVPLLQPYFNHQIDISDNEYFVSFDYRDGDW : OrigSeq
Jnet : --EEEEEEE-----EEEEEEE-------HHHHHH--------------H--HHHHHHHH-------------EEEEEEE----- : Jnet
jhmm : --EEEEEEE-----EEEEEEEE------HHHHHH-----------------HHHHHHH-------EE-----EEEEEEE----- : jhmm
jpssm : ---EEEEEE-----EEEEEE--------HHHHHH-------------HHH---HHHHHHHH----------EEEEEEEE----- : jpssm
Lupas 14 : ------------------------------------------------------------------------------------ : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------------ : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------------ : Lupas 28
Jnet_25 : -B-BBB-BB------B-B-BBB--B--BB-BB--B-B-----BBB-BB-B---BB--BB-BB-B-B-B--BBBBBBB-B----- : Jnet_25
Jnet_5 : -----B--B------------B--------BB--B-------B------B-------B---B----------B-BBB------- : Jnet_5
Jnet_0 : ------------------------------B--------------------------B-----------------B-------- : Jnet_0
Jnet Rel : 980578885268733520022267876427766415778776567640100330355511323541277762688886158899 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.