SILENT_MODE BLOCK_FILE jp_qEojSVF.concise.blc MAX_NSEQ 1064 MAX_INPUT_LEN 1066 OUTPUT_FILE jp_qEojSVF.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 326 1053 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1054 326 1063 H SPACE SUB_CHARS 1 1054 326 1063 E SPACE SUB_CHARS 1 1054 326 1063 - SPACE STRAND 3 1057 7 COLOUR_TEXT_REGION 3 1057 7 1057 51 STRAND 29 1057 36 COLOUR_TEXT_REGION 29 1057 36 1057 51 STRAND 131 1057 135 COLOUR_TEXT_REGION 131 1057 135 1057 51 STRAND 159 1057 164 COLOUR_TEXT_REGION 159 1057 164 1057 51 STRAND 167 1057 167 COLOUR_TEXT_REGION 167 1057 167 1057 51 STRAND 204 1057 207 COLOUR_TEXT_REGION 204 1057 207 1057 51 STRAND 262 1057 268 COLOUR_TEXT_REGION 262 1057 268 1057 51 STRAND 274 1057 284 COLOUR_TEXT_REGION 274 1057 284 1057 51 STRAND 291 1057 296 COLOUR_TEXT_REGION 291 1057 296 1057 51 STRAND 303 1057 309 COLOUR_TEXT_REGION 303 1057 309 1057 51 HELIX 12 1057 23 COLOUR_TEXT_REGION 12 1057 23 1057 50 HELIX 42 1057 56 COLOUR_TEXT_REGION 42 1057 56 1057 50 HELIX 116 1057 125 COLOUR_TEXT_REGION 116 1057 125 1057 50 HELIX 139 1057 157 COLOUR_TEXT_REGION 139 1057 157 1057 50 HELIX 190 1057 199 COLOUR_TEXT_REGION 190 1057 199 1057 50 HELIX 219 1057 227 COLOUR_TEXT_REGION 219 1057 227 1057 50 HELIX 233 1057 247 COLOUR_TEXT_REGION 233 1057 247 1057 50 HELIX 312 1057 324 COLOUR_TEXT_REGION 312 1057 324 1057 50 STRAND 3 1062 7 COLOUR_TEXT_REGION 3 1062 7 1062 51 STRAND 30 1062 36 COLOUR_TEXT_REGION 30 1062 36 1062 51 STRAND 131 1062 136 COLOUR_TEXT_REGION 131 1062 136 1062 51 STRAND 159 1062 167 COLOUR_TEXT_REGION 159 1062 167 1062 51 STRAND 204 1062 207 COLOUR_TEXT_REGION 204 1062 207 1062 51 STRAND 215 1062 216 COLOUR_TEXT_REGION 215 1062 216 1062 51 STRAND 266 1062 268 COLOUR_TEXT_REGION 266 1062 268 1062 51 STRAND 274 1062 284 COLOUR_TEXT_REGION 274 1062 284 1062 51 STRAND 290 1062 296 COLOUR_TEXT_REGION 290 1062 296 1062 51 STRAND 304 1062 309 COLOUR_TEXT_REGION 304 1062 309 1062 51 HELIX 12 1062 23 COLOUR_TEXT_REGION 12 1062 23 1062 50 HELIX 42 1062 56 COLOUR_TEXT_REGION 42 1062 56 1062 50 HELIX 116 1062 126 COLOUR_TEXT_REGION 116 1062 126 1062 50 HELIX 139 1062 148 COLOUR_TEXT_REGION 139 1062 148 1062 50 HELIX 151 1062 157 COLOUR_TEXT_REGION 151 1062 157 1062 50 HELIX 183 1062 186 COLOUR_TEXT_REGION 183 1062 186 1062 50 HELIX 190 1062 198 COLOUR_TEXT_REGION 190 1062 198 1062 50 HELIX 219 1062 227 COLOUR_TEXT_REGION 219 1062 227 1062 50 HELIX 232 1062 247 COLOUR_TEXT_REGION 232 1062 247 1062 50 HELIX 260 1062 265 COLOUR_TEXT_REGION 260 1062 265 1062 50 HELIX 312 1062 324 COLOUR_TEXT_REGION 312 1062 324 1062 50 STRAND 4 1063 7 COLOUR_TEXT_REGION 4 1063 7 1063 51 STRAND 29 1063 36 COLOUR_TEXT_REGION 29 1063 36 1063 51 STRAND 94 1063 94 COLOUR_TEXT_REGION 94 1063 94 1063 51 STRAND 130 1063 135 COLOUR_TEXT_REGION 130 1063 135 1063 51 STRAND 161 1063 163 COLOUR_TEXT_REGION 161 1063 163 1063 51 STRAND 168 1063 168 COLOUR_TEXT_REGION 168 1063 168 1063 51 STRAND 204 1063 206 COLOUR_TEXT_REGION 204 1063 206 1063 51 STRAND 262 1063 267 COLOUR_TEXT_REGION 262 1063 267 1063 51 STRAND 273 1063 284 COLOUR_TEXT_REGION 273 1063 284 1063 51 STRAND 292 1063 296 COLOUR_TEXT_REGION 292 1063 296 1063 51 STRAND 303 1063 309 COLOUR_TEXT_REGION 303 1063 309 1063 51 HELIX 12 1063 22 COLOUR_TEXT_REGION 12 1063 22 1063 50 HELIX 43 1063 56 COLOUR_TEXT_REGION 43 1063 56 1063 50 HELIX 82 1063 87 COLOUR_TEXT_REGION 82 1063 87 1063 50 HELIX 115 1063 125 COLOUR_TEXT_REGION 115 1063 125 1063 50 HELIX 140 1063 157 COLOUR_TEXT_REGION 140 1063 157 1063 50 HELIX 159 1063 160 COLOUR_TEXT_REGION 159 1063 160 1063 50 HELIX 190 1063 199 COLOUR_TEXT_REGION 190 1063 199 1063 50 HELIX 219 1063 228 COLOUR_TEXT_REGION 219 1063 228 1063 50 HELIX 233 1063 246 COLOUR_TEXT_REGION 233 1063 246 1063 50 HELIX 312 1063 325 COLOUR_TEXT_REGION 312 1063 325 1063 50