SILENT_MODE BLOCK_FILE jp_47ZDymW.concise.blc MAX_NSEQ 972 MAX_INPUT_LEN 974 OUTPUT_FILE jp_47ZDymW.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 286 961 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 962 286 971 H SPACE SUB_CHARS 1 962 286 971 E SPACE SUB_CHARS 1 962 286 971 - SPACE STRAND 22 965 27 COLOUR_TEXT_REGION 22 965 27 965 51 STRAND 53 965 57 COLOUR_TEXT_REGION 53 965 57 965 51 STRAND 84 965 90 COLOUR_TEXT_REGION 84 965 90 965 51 STRAND 111 965 116 COLOUR_TEXT_REGION 111 965 116 965 51 STRAND 142 965 143 COLOUR_TEXT_REGION 142 965 143 965 51 STRAND 171 965 174 COLOUR_TEXT_REGION 171 965 174 965 51 STRAND 198 965 202 COLOUR_TEXT_REGION 198 965 202 965 51 STRAND 264 965 267 COLOUR_TEXT_REGION 264 965 267 965 51 HELIX 4 965 16 COLOUR_TEXT_REGION 4 965 16 965 50 HELIX 35 965 47 COLOUR_TEXT_REGION 35 965 47 965 50 HELIX 68 965 78 COLOUR_TEXT_REGION 68 965 78 965 50 HELIX 94 965 107 COLOUR_TEXT_REGION 94 965 107 965 50 HELIX 125 965 134 COLOUR_TEXT_REGION 125 965 134 965 50 HELIX 153 965 167 COLOUR_TEXT_REGION 153 965 167 965 50 HELIX 180 965 192 COLOUR_TEXT_REGION 180 965 192 965 50 HELIX 209 965 217 COLOUR_TEXT_REGION 209 965 217 965 50 HELIX 225 965 233 COLOUR_TEXT_REGION 225 965 233 965 50 HELIX 238 965 258 COLOUR_TEXT_REGION 238 965 258 965 50 HELIX 272 965 281 COLOUR_TEXT_REGION 272 965 281 965 50 STRAND 22 970 27 COLOUR_TEXT_REGION 22 970 27 970 51 STRAND 53 970 57 COLOUR_TEXT_REGION 53 970 57 970 51 STRAND 84 970 89 COLOUR_TEXT_REGION 84 970 89 970 51 STRAND 111 970 116 COLOUR_TEXT_REGION 111 970 116 970 51 STRAND 141 970 144 COLOUR_TEXT_REGION 141 970 144 970 51 STRAND 171 970 174 COLOUR_TEXT_REGION 171 970 174 970 51 STRAND 198 970 203 COLOUR_TEXT_REGION 198 970 203 970 51 STRAND 264 970 267 COLOUR_TEXT_REGION 264 970 267 970 51 HELIX 3 970 16 COLOUR_TEXT_REGION 3 970 16 970 50 HELIX 35 970 47 COLOUR_TEXT_REGION 35 970 47 970 50 HELIX 68 970 78 COLOUR_TEXT_REGION 68 970 78 970 50 HELIX 94 970 107 COLOUR_TEXT_REGION 94 970 107 970 50 HELIX 125 970 133 COLOUR_TEXT_REGION 125 970 133 970 50 HELIX 154 970 167 COLOUR_TEXT_REGION 154 970 167 970 50 HELIX 180 970 192 COLOUR_TEXT_REGION 180 970 192 970 50 HELIX 209 970 217 COLOUR_TEXT_REGION 209 970 217 970 50 HELIX 225 970 233 COLOUR_TEXT_REGION 225 970 233 970 50 HELIX 238 970 258 COLOUR_TEXT_REGION 238 970 258 970 50 HELIX 272 970 281 COLOUR_TEXT_REGION 272 970 281 970 50 STRAND 22 971 28 COLOUR_TEXT_REGION 22 971 28 971 51 STRAND 53 971 57 COLOUR_TEXT_REGION 53 971 57 971 51 STRAND 83 971 91 COLOUR_TEXT_REGION 83 971 91 971 51 STRAND 111 971 115 COLOUR_TEXT_REGION 111 971 115 971 51 STRAND 170 971 173 COLOUR_TEXT_REGION 170 971 173 971 51 STRAND 197 971 201 COLOUR_TEXT_REGION 197 971 201 971 51 STRAND 264 971 266 COLOUR_TEXT_REGION 264 971 266 971 51 HELIX 4 971 16 COLOUR_TEXT_REGION 4 971 16 971 50 HELIX 34 971 48 COLOUR_TEXT_REGION 34 971 48 971 50 HELIX 67 971 78 COLOUR_TEXT_REGION 67 971 78 971 50 HELIX 94 971 107 COLOUR_TEXT_REGION 94 971 107 971 50 HELIX 125 971 134 COLOUR_TEXT_REGION 125 971 134 971 50 HELIX 153 971 167 COLOUR_TEXT_REGION 153 971 167 971 50 HELIX 180 971 191 COLOUR_TEXT_REGION 180 971 191 971 50 HELIX 209 971 218 COLOUR_TEXT_REGION 209 971 218 971 50 HELIX 225 971 233 COLOUR_TEXT_REGION 225 971 233 971 50 HELIX 238 971 258 COLOUR_TEXT_REGION 238 971 258 971 50 HELIX 272 971 281 COLOUR_TEXT_REGION 272 971 281 971 50