SILENT_MODE
BLOCK_FILE jp_BHb0hf5.concise.blc
MAX_NSEQ 149
MAX_INPUT_LEN 151
OUTPUT_FILE jp_BHb0hf5.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 77 138   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 139 77 148 H SPACE
SUB_CHARS 1 139 77 148 E SPACE
SUB_CHARS 1 139 77 148 - SPACE
STRAND 7 142 9
COLOUR_TEXT_REGION 7 142 9 142 51
HELIX 15 142 28
COLOUR_TEXT_REGION 15 142 28 142 50
HELIX 35 142 45
COLOUR_TEXT_REGION 35 142 45 142 50
HELIX 50 142 58
COLOUR_TEXT_REGION 50 142 58 142 50
HELIX 66 142 75
COLOUR_TEXT_REGION 66 142 75 142 50
STRAND 7 147 9
COLOUR_TEXT_REGION 7 147 9 147 51
HELIX 15 147 27
COLOUR_TEXT_REGION 15 147 27 147 50
HELIX 35 147 45
COLOUR_TEXT_REGION 35 147 45 147 50
HELIX 50 147 58
COLOUR_TEXT_REGION 50 147 58 147 50
HELIX 66 147 75
COLOUR_TEXT_REGION 66 147 75 147 50
HELIX 16 148 28
COLOUR_TEXT_REGION 16 148 28 148 50
HELIX 35 148 46
COLOUR_TEXT_REGION 35 148 46 148 50
HELIX 50 148 58
COLOUR_TEXT_REGION 50 148 58 148 50
HELIX 66 148 75
COLOUR_TEXT_REGION 66 148 75 148 50