SILENT_MODE BLOCK_FILE jp_XRYd1Hg.concise.blc MAX_NSEQ 893 MAX_INPUT_LEN 895 OUTPUT_FILE jp_XRYd1Hg.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 260 882 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 883 260 892 H SPACE SUB_CHARS 1 883 260 892 E SPACE SUB_CHARS 1 883 260 892 - SPACE STRAND 3 886 8 COLOUR_TEXT_REGION 3 886 8 886 51 STRAND 32 886 38 COLOUR_TEXT_REGION 32 886 38 886 51 STRAND 56 886 60 COLOUR_TEXT_REGION 56 886 60 886 51 STRAND 68 886 74 COLOUR_TEXT_REGION 68 886 74 886 51 STRAND 93 886 99 COLOUR_TEXT_REGION 93 886 99 886 51 STRAND 104 886 110 COLOUR_TEXT_REGION 104 886 110 886 51 STRAND 146 886 148 COLOUR_TEXT_REGION 146 886 148 886 51 STRAND 189 886 194 COLOUR_TEXT_REGION 189 886 194 886 51 STRAND 203 886 203 COLOUR_TEXT_REGION 203 886 203 886 51 STRAND 223 886 224 COLOUR_TEXT_REGION 223 886 224 886 51 STRAND 235 886 235 COLOUR_TEXT_REGION 235 886 235 886 51 STRAND 237 886 238 COLOUR_TEXT_REGION 237 886 238 886 51 STRAND 250 886 255 COLOUR_TEXT_REGION 250 886 255 886 51 HELIX 13 886 27 COLOUR_TEXT_REGION 13 886 27 886 50 HELIX 46 886 50 COLOUR_TEXT_REGION 46 886 50 886 50 HELIX 122 886 140 COLOUR_TEXT_REGION 122 886 140 886 50 HELIX 174 886 184 COLOUR_TEXT_REGION 174 886 184 886 50 HELIX 222 886 222 COLOUR_TEXT_REGION 222 886 222 886 50 HELIX 227 886 234 COLOUR_TEXT_REGION 227 886 234 886 50 STRAND 3 891 7 COLOUR_TEXT_REGION 3 891 7 891 51 STRAND 32 891 39 COLOUR_TEXT_REGION 32 891 39 891 51 STRAND 56 891 60 COLOUR_TEXT_REGION 56 891 60 891 51 STRAND 68 891 75 COLOUR_TEXT_REGION 68 891 75 891 51 STRAND 93 891 100 COLOUR_TEXT_REGION 93 891 100 891 51 STRAND 104 891 110 COLOUR_TEXT_REGION 104 891 110 891 51 STRAND 145 891 149 COLOUR_TEXT_REGION 145 891 149 891 51 STRAND 189 891 194 COLOUR_TEXT_REGION 189 891 194 891 51 STRAND 202 891 205 COLOUR_TEXT_REGION 202 891 205 891 51 STRAND 222 891 225 COLOUR_TEXT_REGION 222 891 225 891 51 STRAND 250 891 255 COLOUR_TEXT_REGION 250 891 255 891 51 HELIX 8 891 10 COLOUR_TEXT_REGION 8 891 10 891 50 HELIX 13 891 27 COLOUR_TEXT_REGION 13 891 27 891 50 HELIX 47 891 50 COLOUR_TEXT_REGION 47 891 50 891 50 HELIX 121 891 139 COLOUR_TEXT_REGION 121 891 139 891 50 HELIX 174 891 184 COLOUR_TEXT_REGION 174 891 184 891 50 HELIX 227 891 234 COLOUR_TEXT_REGION 227 891 234 891 50 STRAND 3 892 8 COLOUR_TEXT_REGION 3 892 8 892 51 STRAND 32 892 37 COLOUR_TEXT_REGION 32 892 37 892 51 STRAND 57 892 61 COLOUR_TEXT_REGION 57 892 61 892 51 STRAND 68 892 73 COLOUR_TEXT_REGION 68 892 73 892 51 STRAND 83 892 84 COLOUR_TEXT_REGION 83 892 84 892 51 STRAND 94 892 99 COLOUR_TEXT_REGION 94 892 99 892 51 STRAND 103 892 110 COLOUR_TEXT_REGION 103 892 110 892 51 STRAND 233 892 238 COLOUR_TEXT_REGION 233 892 238 892 51 STRAND 249 892 255 COLOUR_TEXT_REGION 249 892 255 892 51 HELIX 13 892 27 COLOUR_TEXT_REGION 13 892 27 892 50 HELIX 46 892 50 COLOUR_TEXT_REGION 46 892 50 892 50 HELIX 128 892 140 COLOUR_TEXT_REGION 128 892 140 892 50 HELIX 157 892 160 COLOUR_TEXT_REGION 157 892 160 892 50 HELIX 174 892 183 COLOUR_TEXT_REGION 174 892 183 892 50 HELIX 189 892 195 COLOUR_TEXT_REGION 189 892 195 892 50 HELIX 210 892 224 COLOUR_TEXT_REGION 210 892 224 892 50 HELIX 229 892 232 COLOUR_TEXT_REGION 229 892 232 892 50