SILENT_MODE BLOCK_FILE jp_DDjZrsA.concise.blc MAX_NSEQ 1237 MAX_INPUT_LEN 1239 OUTPUT_FILE jp_DDjZrsA.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 212 1226 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1227 212 1236 H SPACE SUB_CHARS 1 1227 212 1236 E SPACE SUB_CHARS 1 1227 212 1236 - SPACE STRAND 2 1230 6 COLOUR_TEXT_REGION 2 1230 6 1230 51 STRAND 34 1230 44 COLOUR_TEXT_REGION 34 1230 44 1230 51 STRAND 62 1230 68 COLOUR_TEXT_REGION 62 1230 68 1230 51 STRAND 75 1230 82 COLOUR_TEXT_REGION 75 1230 82 1230 51 STRAND 109 1230 111 COLOUR_TEXT_REGION 109 1230 111 1230 51 STRAND 131 1230 131 COLOUR_TEXT_REGION 131 1230 131 1230 51 STRAND 161 1230 166 COLOUR_TEXT_REGION 161 1230 166 1230 51 HELIX 18 1230 26 COLOUR_TEXT_REGION 18 1230 26 1230 50 HELIX 45 1230 57 COLOUR_TEXT_REGION 45 1230 57 1230 50 HELIX 116 1230 125 COLOUR_TEXT_REGION 116 1230 125 1230 50 HELIX 142 1230 154 COLOUR_TEXT_REGION 142 1230 154 1230 50 HELIX 184 1230 200 COLOUR_TEXT_REGION 184 1230 200 1230 50 STRAND 2 1235 6 COLOUR_TEXT_REGION 2 1235 6 1235 51 STRAND 34 1235 44 COLOUR_TEXT_REGION 34 1235 44 1235 51 STRAND 62 1235 67 COLOUR_TEXT_REGION 62 1235 67 1235 51 STRAND 75 1235 83 COLOUR_TEXT_REGION 75 1235 83 1235 51 STRAND 110 1235 111 COLOUR_TEXT_REGION 110 1235 111 1235 51 STRAND 130 1235 132 COLOUR_TEXT_REGION 130 1235 132 1235 51 STRAND 161 1235 166 COLOUR_TEXT_REGION 161 1235 166 1235 51 HELIX 18 1235 26 COLOUR_TEXT_REGION 18 1235 26 1235 50 HELIX 46 1235 57 COLOUR_TEXT_REGION 46 1235 57 1235 50 HELIX 116 1235 125 COLOUR_TEXT_REGION 116 1235 125 1235 50 HELIX 142 1235 154 COLOUR_TEXT_REGION 142 1235 154 1235 50 HELIX 184 1235 200 COLOUR_TEXT_REGION 184 1235 200 1235 50 STRAND 2 1236 6 COLOUR_TEXT_REGION 2 1236 6 1236 51 STRAND 34 1236 41 COLOUR_TEXT_REGION 34 1236 41 1236 51 STRAND 62 1236 68 COLOUR_TEXT_REGION 62 1236 68 1236 51 STRAND 75 1236 81 COLOUR_TEXT_REGION 75 1236 81 1236 51 STRAND 108 1236 111 COLOUR_TEXT_REGION 108 1236 111 1236 51 STRAND 160 1236 166 COLOUR_TEXT_REGION 160 1236 166 1236 51 STRAND 205 1236 205 COLOUR_TEXT_REGION 205 1236 205 1236 51 HELIX 19 1236 26 COLOUR_TEXT_REGION 19 1236 26 1236 50 HELIX 44 1236 57 COLOUR_TEXT_REGION 44 1236 57 1236 50 HELIX 116 1236 125 COLOUR_TEXT_REGION 116 1236 125 1236 50 HELIX 141 1236 154 COLOUR_TEXT_REGION 141 1236 154 1236 50 HELIX 184 1236 200 COLOUR_TEXT_REGION 184 1236 200 1236 50