SILENT_MODE BLOCK_FILE jp_954gExy.concise.blc MAX_NSEQ 103 MAX_INPUT_LEN 105 OUTPUT_FILE jp_954gExy.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 155 92 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 93 155 102 H SPACE SUB_CHARS 1 93 155 102 E SPACE SUB_CHARS 1 93 155 102 - SPACE STRAND 25 96 32 COLOUR_TEXT_REGION 25 96 32 96 51 STRAND 47 96 53 COLOUR_TEXT_REGION 47 96 53 96 51 STRAND 60 96 68 COLOUR_TEXT_REGION 60 96 68 96 51 STRAND 76 96 78 COLOUR_TEXT_REGION 76 96 78 96 51 STRAND 83 96 85 COLOUR_TEXT_REGION 83 96 85 96 51 STRAND 95 96 99 COLOUR_TEXT_REGION 95 96 99 96 51 STRAND 121 96 124 COLOUR_TEXT_REGION 121 96 124 96 51 STRAND 129 96 136 COLOUR_TEXT_REGION 129 96 136 96 51 STRAND 145 96 153 COLOUR_TEXT_REGION 145 96 153 96 51 HELIX 5 96 18 COLOUR_TEXT_REGION 5 96 18 96 50 HELIX 100 96 105 COLOUR_TEXT_REGION 100 96 105 96 50 HELIX 120 96 120 COLOUR_TEXT_REGION 120 96 120 96 50 STRAND 25 101 32 COLOUR_TEXT_REGION 25 101 32 101 51 STRAND 47 101 53 COLOUR_TEXT_REGION 47 101 53 101 51 STRAND 60 101 69 COLOUR_TEXT_REGION 60 101 69 101 51 STRAND 97 101 98 COLOUR_TEXT_REGION 97 101 98 101 51 STRAND 121 101 125 COLOUR_TEXT_REGION 121 101 125 101 51 STRAND 129 101 136 COLOUR_TEXT_REGION 129 101 136 101 51 STRAND 145 101 153 COLOUR_TEXT_REGION 145 101 153 101 51 HELIX 5 101 19 COLOUR_TEXT_REGION 5 101 19 101 50 HELIX 76 101 79 COLOUR_TEXT_REGION 76 101 79 101 50 HELIX 82 101 84 COLOUR_TEXT_REGION 82 101 84 101 50 HELIX 99 101 105 COLOUR_TEXT_REGION 99 101 105 101 50 STRAND 25 102 31 COLOUR_TEXT_REGION 25 102 31 102 51 STRAND 48 102 53 COLOUR_TEXT_REGION 48 102 53 102 51 STRAND 60 102 64 COLOUR_TEXT_REGION 60 102 64 102 51 STRAND 67 102 67 COLOUR_TEXT_REGION 67 102 67 102 51 STRAND 76 102 79 COLOUR_TEXT_REGION 76 102 79 102 51 STRAND 84 102 87 COLOUR_TEXT_REGION 84 102 87 102 51 STRAND 94 102 99 COLOUR_TEXT_REGION 94 102 99 102 51 STRAND 122 102 124 COLOUR_TEXT_REGION 122 102 124 102 51 STRAND 129 102 137 COLOUR_TEXT_REGION 129 102 137 102 51 STRAND 145 102 146 COLOUR_TEXT_REGION 145 102 146 102 51 STRAND 152 102 153 COLOUR_TEXT_REGION 152 102 153 102 51 HELIX 6 102 16 COLOUR_TEXT_REGION 6 102 16 102 50 HELIX 65 102 66 COLOUR_TEXT_REGION 65 102 66 102 50 HELIX 100 102 106 COLOUR_TEXT_REGION 100 102 106 102 50 HELIX 116 102 121 COLOUR_TEXT_REGION 116 102 121 102 50 HELIX 147 102 151 COLOUR_TEXT_REGION 147 102 151 102 50