SILENT_MODE BLOCK_FILE jp_MTj5VqT.concise.blc MAX_NSEQ 627 MAX_INPUT_LEN 629 OUTPUT_FILE jp_MTj5VqT.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 382 616 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 617 382 626 H SPACE SUB_CHARS 1 617 382 626 E SPACE SUB_CHARS 1 617 382 626 - SPACE STRAND 37 620 42 COLOUR_TEXT_REGION 37 620 42 620 51 STRAND 66 620 72 COLOUR_TEXT_REGION 66 620 72 620 51 STRAND 139 620 140 COLOUR_TEXT_REGION 139 620 140 620 51 STRAND 189 620 195 COLOUR_TEXT_REGION 189 620 195 620 51 STRAND 201 620 205 COLOUR_TEXT_REGION 201 620 205 620 51 STRAND 352 620 355 COLOUR_TEXT_REGION 352 620 355 620 51 STRAND 359 620 362 COLOUR_TEXT_REGION 359 620 362 620 51 HELIX 4 620 9 COLOUR_TEXT_REGION 4 620 9 620 50 HELIX 15 620 29 COLOUR_TEXT_REGION 15 620 29 620 50 HELIX 46 620 57 COLOUR_TEXT_REGION 46 620 57 620 50 HELIX 83 620 96 COLOUR_TEXT_REGION 83 620 96 620 50 HELIX 120 620 135 COLOUR_TEXT_REGION 120 620 135 620 50 HELIX 146 620 153 COLOUR_TEXT_REGION 146 620 153 620 50 HELIX 162 620 177 COLOUR_TEXT_REGION 162 620 177 620 50 HELIX 216 620 249 COLOUR_TEXT_REGION 216 620 249 620 50 HELIX 260 620 267 COLOUR_TEXT_REGION 260 620 267 620 50 HELIX 275 620 282 COLOUR_TEXT_REGION 275 620 282 620 50 HELIX 292 620 302 COLOUR_TEXT_REGION 292 620 302 620 50 HELIX 307 620 318 COLOUR_TEXT_REGION 307 620 318 620 50 HELIX 369 620 380 COLOUR_TEXT_REGION 369 620 380 620 50 STRAND 37 625 43 COLOUR_TEXT_REGION 37 625 43 625 51 STRAND 66 625 72 COLOUR_TEXT_REGION 66 625 72 625 51 STRAND 103 625 104 COLOUR_TEXT_REGION 103 625 104 625 51 STRAND 139 625 140 COLOUR_TEXT_REGION 139 625 140 625 51 STRAND 188 625 195 COLOUR_TEXT_REGION 188 625 195 625 51 STRAND 201 625 204 COLOUR_TEXT_REGION 201 625 204 625 51 STRAND 283 625 283 COLOUR_TEXT_REGION 283 625 283 625 51 STRAND 352 625 355 COLOUR_TEXT_REGION 352 625 355 625 51 STRAND 359 625 362 COLOUR_TEXT_REGION 359 625 362 625 51 HELIX 3 625 9 COLOUR_TEXT_REGION 3 625 9 625 50 HELIX 15 625 29 COLOUR_TEXT_REGION 15 625 29 625 50 HELIX 46 625 56 COLOUR_TEXT_REGION 46 625 56 625 50 HELIX 83 625 95 COLOUR_TEXT_REGION 83 625 95 625 50 HELIX 120 625 135 COLOUR_TEXT_REGION 120 625 135 625 50 HELIX 146 625 152 COLOUR_TEXT_REGION 146 625 152 625 50 HELIX 162 625 177 COLOUR_TEXT_REGION 162 625 177 625 50 HELIX 216 625 249 COLOUR_TEXT_REGION 216 625 249 625 50 HELIX 260 625 268 COLOUR_TEXT_REGION 260 625 268 625 50 HELIX 275 625 282 COLOUR_TEXT_REGION 275 625 282 625 50 HELIX 292 625 302 COLOUR_TEXT_REGION 292 625 302 625 50 HELIX 306 625 317 COLOUR_TEXT_REGION 306 625 317 625 50 HELIX 369 625 380 COLOUR_TEXT_REGION 369 625 380 625 50 STRAND 37 626 42 COLOUR_TEXT_REGION 37 626 42 626 51 STRAND 65 626 72 COLOUR_TEXT_REGION 65 626 72 626 51 STRAND 139 626 140 COLOUR_TEXT_REGION 139 626 140 626 51 STRAND 191 626 193 COLOUR_TEXT_REGION 191 626 193 626 51 STRAND 201 626 207 COLOUR_TEXT_REGION 201 626 207 626 51 STRAND 248 626 248 COLOUR_TEXT_REGION 248 626 248 626 51 STRAND 293 626 295 COLOUR_TEXT_REGION 293 626 295 626 51 STRAND 335 626 337 COLOUR_TEXT_REGION 335 626 337 626 51 STRAND 351 626 355 COLOUR_TEXT_REGION 351 626 355 626 51 STRAND 360 626 362 COLOUR_TEXT_REGION 360 626 362 626 51 HELIX 4 626 8 COLOUR_TEXT_REGION 4 626 8 626 50 HELIX 15 626 29 COLOUR_TEXT_REGION 15 626 29 626 50 HELIX 45 626 58 COLOUR_TEXT_REGION 45 626 58 626 50 HELIX 83 626 96 COLOUR_TEXT_REGION 83 626 96 626 50 HELIX 120 626 135 COLOUR_TEXT_REGION 120 626 135 626 50 HELIX 147 626 153 COLOUR_TEXT_REGION 147 626 153 626 50 HELIX 161 626 177 COLOUR_TEXT_REGION 161 626 177 626 50 HELIX 216 626 243 COLOUR_TEXT_REGION 216 626 243 626 50 HELIX 260 626 266 COLOUR_TEXT_REGION 260 626 266 626 50 HELIX 275 626 281 COLOUR_TEXT_REGION 275 626 281 626 50 HELIX 296 626 304 COLOUR_TEXT_REGION 296 626 304 626 50 HELIX 309 626 319 COLOUR_TEXT_REGION 309 626 319 626 50 HELIX 369 626 380 COLOUR_TEXT_REGION 369 626 380 626 50