SILENT_MODE BLOCK_FILE jp_TvzYb9X.concise.blc MAX_NSEQ 183 MAX_INPUT_LEN 185 OUTPUT_FILE jp_TvzYb9X.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 202 172 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 173 202 182 H SPACE SUB_CHARS 1 173 202 182 E SPACE SUB_CHARS 1 173 202 182 - SPACE STRAND 56 176 61 COLOUR_TEXT_REGION 56 176 61 176 51 STRAND 91 176 96 COLOUR_TEXT_REGION 91 176 96 176 51 STRAND 102 176 107 COLOUR_TEXT_REGION 102 176 107 176 51 STRAND 154 176 159 COLOUR_TEXT_REGION 154 176 159 176 51 STRAND 164 176 170 COLOUR_TEXT_REGION 164 176 170 176 51 HELIX 16 176 29 COLOUR_TEXT_REGION 16 176 29 176 50 HELIX 35 176 47 COLOUR_TEXT_REGION 35 176 47 176 50 HELIX 65 176 72 COLOUR_TEXT_REGION 65 176 72 176 50 HELIX 75 176 82 COLOUR_TEXT_REGION 75 176 82 176 50 HELIX 128 176 136 COLOUR_TEXT_REGION 128 176 136 176 50 HELIX 138 176 144 COLOUR_TEXT_REGION 138 176 144 176 50 HELIX 181 176 188 COLOUR_TEXT_REGION 181 176 188 176 50 STRAND 56 181 61 COLOUR_TEXT_REGION 56 181 61 181 51 STRAND 92 181 96 COLOUR_TEXT_REGION 92 181 96 181 51 STRAND 102 181 107 COLOUR_TEXT_REGION 102 181 107 181 51 STRAND 154 181 159 COLOUR_TEXT_REGION 154 181 159 181 51 STRAND 164 181 169 COLOUR_TEXT_REGION 164 181 169 181 51 STRAND 196 181 196 COLOUR_TEXT_REGION 196 181 196 181 51 HELIX 16 181 29 COLOUR_TEXT_REGION 16 181 29 181 50 HELIX 35 181 47 COLOUR_TEXT_REGION 35 181 47 181 50 HELIX 65 181 72 COLOUR_TEXT_REGION 65 181 72 181 50 HELIX 75 181 82 COLOUR_TEXT_REGION 75 181 82 181 50 HELIX 128 181 144 COLOUR_TEXT_REGION 128 181 144 181 50 HELIX 181 181 188 COLOUR_TEXT_REGION 181 181 188 181 50 STRAND 56 182 60 COLOUR_TEXT_REGION 56 182 60 182 51 STRAND 91 182 96 COLOUR_TEXT_REGION 91 182 96 182 51 STRAND 101 182 106 COLOUR_TEXT_REGION 101 182 106 182 51 STRAND 154 182 159 COLOUR_TEXT_REGION 154 182 159 182 51 STRAND 164 182 171 COLOUR_TEXT_REGION 164 182 171 182 51 STRAND 194 182 195 COLOUR_TEXT_REGION 194 182 195 182 51 HELIX 15 182 29 COLOUR_TEXT_REGION 15 182 29 182 50 HELIX 35 182 48 COLOUR_TEXT_REGION 35 182 48 182 50 HELIX 65 182 73 COLOUR_TEXT_REGION 65 182 73 182 50 HELIX 75 182 82 COLOUR_TEXT_REGION 75 182 82 182 50 HELIX 128 182 136 COLOUR_TEXT_REGION 128 182 136 182 50 HELIX 139 182 145 COLOUR_TEXT_REGION 139 182 145 182 50 HELIX 181 182 188 COLOUR_TEXT_REGION 181 182 188 182 50