SILENT_MODE BLOCK_FILE jp_JkhrVEn.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_JkhrVEn.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 520 10 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 11 520 20 H SPACE SUB_CHARS 1 11 520 20 E SPACE SUB_CHARS 1 11 520 20 - SPACE STRAND 30 14 30 COLOUR_TEXT_REGION 30 14 30 14 51 STRAND 37 14 41 COLOUR_TEXT_REGION 37 14 41 14 51 STRAND 51 14 57 COLOUR_TEXT_REGION 51 14 57 14 51 STRAND 64 14 67 COLOUR_TEXT_REGION 64 14 67 14 51 STRAND 76 14 78 COLOUR_TEXT_REGION 76 14 78 14 51 STRAND 92 14 95 COLOUR_TEXT_REGION 92 14 95 14 51 STRAND 99 14 105 COLOUR_TEXT_REGION 99 14 105 14 51 STRAND 116 14 122 COLOUR_TEXT_REGION 116 14 122 14 51 STRAND 148 14 154 COLOUR_TEXT_REGION 148 14 154 14 51 STRAND 158 14 166 COLOUR_TEXT_REGION 158 14 166 14 51 STRAND 173 14 177 COLOUR_TEXT_REGION 173 14 177 14 51 STRAND 187 14 187 COLOUR_TEXT_REGION 187 14 187 14 51 STRAND 193 14 195 COLOUR_TEXT_REGION 193 14 195 14 51 STRAND 201 14 207 COLOUR_TEXT_REGION 201 14 207 14 51 STRAND 216 14 218 COLOUR_TEXT_REGION 216 14 218 14 51 STRAND 227 14 237 COLOUR_TEXT_REGION 227 14 237 14 51 STRAND 241 14 245 COLOUR_TEXT_REGION 241 14 245 14 51 STRAND 260 14 263 COLOUR_TEXT_REGION 260 14 263 14 51 STRAND 281 14 287 COLOUR_TEXT_REGION 281 14 287 14 51 STRAND 290 14 292 COLOUR_TEXT_REGION 290 14 292 14 51 STRAND 296 14 302 COLOUR_TEXT_REGION 296 14 302 14 51 STRAND 310 14 317 COLOUR_TEXT_REGION 310 14 317 14 51 STRAND 325 14 331 COLOUR_TEXT_REGION 325 14 331 14 51 STRAND 343 14 347 COLOUR_TEXT_REGION 343 14 347 14 51 STRAND 350 14 356 COLOUR_TEXT_REGION 350 14 356 14 51 STRAND 366 14 371 COLOUR_TEXT_REGION 366 14 371 14 51 STRAND 399 14 406 COLOUR_TEXT_REGION 399 14 406 14 51 STRAND 431 14 434 COLOUR_TEXT_REGION 431 14 434 14 51 STRAND 444 14 448 COLOUR_TEXT_REGION 444 14 448 14 51 STRAND 452 14 453 COLOUR_TEXT_REGION 452 14 453 14 51 STRAND 464 14 469 COLOUR_TEXT_REGION 464 14 469 14 51 STRAND 473 14 479 COLOUR_TEXT_REGION 473 14 479 14 51 STRAND 508 14 515 COLOUR_TEXT_REGION 508 14 515 14 51 HELIX 14 14 23 COLOUR_TEXT_REGION 14 14 23 14 50 HELIX 71 14 72 COLOUR_TEXT_REGION 71 14 72 14 50 HELIX 133 14 136 COLOUR_TEXT_REGION 133 14 136 14 50 HELIX 332 14 334 COLOUR_TEXT_REGION 332 14 334 14 50 HELIX 407 14 410 COLOUR_TEXT_REGION 407 14 410 14 50 HELIX 426 14 430 COLOUR_TEXT_REGION 426 14 430 14 50 STRAND 37 19 41 COLOUR_TEXT_REGION 37 19 41 19 51 STRAND 51 19 57 COLOUR_TEXT_REGION 51 19 57 19 51 STRAND 64 19 66 COLOUR_TEXT_REGION 64 19 66 19 51 STRAND 76 19 78 COLOUR_TEXT_REGION 76 19 78 19 51 STRAND 95 19 95 COLOUR_TEXT_REGION 95 19 95 19 51 STRAND 99 19 105 COLOUR_TEXT_REGION 99 19 105 19 51 STRAND 117 19 122 COLOUR_TEXT_REGION 117 19 122 19 51 STRAND 148 19 155 COLOUR_TEXT_REGION 148 19 155 19 51 STRAND 158 19 166 COLOUR_TEXT_REGION 158 19 166 19 51 STRAND 187 19 188 COLOUR_TEXT_REGION 187 19 188 19 51 STRAND 194 19 194 COLOUR_TEXT_REGION 194 19 194 19 51 STRAND 201 19 207 COLOUR_TEXT_REGION 201 19 207 19 51 STRAND 216 19 218 COLOUR_TEXT_REGION 216 19 218 19 51 STRAND 228 19 237 COLOUR_TEXT_REGION 228 19 237 19 51 STRAND 242 19 245 COLOUR_TEXT_REGION 242 19 245 19 51 STRAND 260 19 263 COLOUR_TEXT_REGION 260 19 263 19 51 STRAND 281 19 287 COLOUR_TEXT_REGION 281 19 287 19 51 STRAND 291 19 292 COLOUR_TEXT_REGION 291 19 292 19 51 STRAND 296 19 302 COLOUR_TEXT_REGION 296 19 302 19 51 STRAND 310 19 317 COLOUR_TEXT_REGION 310 19 317 19 51 STRAND 325 19 330 COLOUR_TEXT_REGION 325 19 330 19 51 STRAND 343 19 347 COLOUR_TEXT_REGION 343 19 347 19 51 STRAND 350 19 356 COLOUR_TEXT_REGION 350 19 356 19 51 STRAND 366 19 372 COLOUR_TEXT_REGION 366 19 372 19 51 STRAND 380 19 381 COLOUR_TEXT_REGION 380 19 381 19 51 STRAND 394 19 395 COLOUR_TEXT_REGION 394 19 395 19 51 STRAND 399 19 406 COLOUR_TEXT_REGION 399 19 406 19 51 STRAND 432 19 434 COLOUR_TEXT_REGION 432 19 434 19 51 STRAND 444 19 449 COLOUR_TEXT_REGION 444 19 449 19 51 STRAND 452 19 453 COLOUR_TEXT_REGION 452 19 453 19 51 STRAND 457 19 458 COLOUR_TEXT_REGION 457 19 458 19 51 STRAND 464 19 469 COLOUR_TEXT_REGION 464 19 469 19 51 STRAND 473 19 479 COLOUR_TEXT_REGION 473 19 479 19 51 STRAND 508 19 515 COLOUR_TEXT_REGION 508 19 515 19 51 HELIX 14 19 23 COLOUR_TEXT_REGION 14 19 23 19 50 HELIX 67 19 74 COLOUR_TEXT_REGION 67 19 74 19 50 HELIX 92 19 94 COLOUR_TEXT_REGION 92 19 94 19 50 HELIX 133 19 137 COLOUR_TEXT_REGION 133 19 137 19 50 HELIX 173 19 176 COLOUR_TEXT_REGION 173 19 176 19 50 HELIX 331 19 336 COLOUR_TEXT_REGION 331 19 336 19 50 HELIX 407 19 411 COLOUR_TEXT_REGION 407 19 411 19 50 HELIX 426 19 431 COLOUR_TEXT_REGION 426 19 431 19 50 STRAND 30 20 32 COLOUR_TEXT_REGION 30 20 32 20 51 STRAND 37 20 41 COLOUR_TEXT_REGION 37 20 41 20 51 STRAND 49 20 56 COLOUR_TEXT_REGION 49 20 56 20 51 STRAND 64 20 67 COLOUR_TEXT_REGION 64 20 67 20 51 STRAND 76 20 79 COLOUR_TEXT_REGION 76 20 79 20 51 STRAND 92 20 95 COLOUR_TEXT_REGION 92 20 95 20 51 STRAND 99 20 106 COLOUR_TEXT_REGION 99 20 106 20 51 STRAND 115 20 122 COLOUR_TEXT_REGION 115 20 122 20 51 STRAND 148 20 153 COLOUR_TEXT_REGION 148 20 153 20 51 STRAND 158 20 166 COLOUR_TEXT_REGION 158 20 166 20 51 STRAND 173 20 178 COLOUR_TEXT_REGION 173 20 178 20 51 STRAND 193 20 196 COLOUR_TEXT_REGION 193 20 196 20 51 STRAND 201 20 207 COLOUR_TEXT_REGION 201 20 207 20 51 STRAND 216 20 218 COLOUR_TEXT_REGION 216 20 218 20 51 STRAND 224 20 228 COLOUR_TEXT_REGION 224 20 228 20 51 STRAND 230 20 237 COLOUR_TEXT_REGION 230 20 237 20 51 STRAND 241 20 245 COLOUR_TEXT_REGION 241 20 245 20 51 STRAND 260 20 263 COLOUR_TEXT_REGION 260 20 263 20 51 STRAND 282 20 284 COLOUR_TEXT_REGION 282 20 284 20 51 STRAND 288 20 291 COLOUR_TEXT_REGION 288 20 291 20 51 STRAND 296 20 302 COLOUR_TEXT_REGION 296 20 302 20 51 STRAND 310 20 317 COLOUR_TEXT_REGION 310 20 317 20 51 STRAND 326 20 331 COLOUR_TEXT_REGION 326 20 331 20 51 STRAND 343 20 347 COLOUR_TEXT_REGION 343 20 347 20 51 STRAND 350 20 355 COLOUR_TEXT_REGION 350 20 355 20 51 STRAND 399 20 406 COLOUR_TEXT_REGION 399 20 406 20 51 STRAND 430 20 434 COLOUR_TEXT_REGION 430 20 434 20 51 STRAND 444 20 448 COLOUR_TEXT_REGION 444 20 448 20 51 STRAND 464 20 469 COLOUR_TEXT_REGION 464 20 469 20 51 STRAND 473 20 478 COLOUR_TEXT_REGION 473 20 478 20 51 STRAND 507 20 514 COLOUR_TEXT_REGION 507 20 514 20 51 HELIX 14 20 23 COLOUR_TEXT_REGION 14 20 23 20 50 HELIX 135 20 135 COLOUR_TEXT_REGION 135 20 135 20 50 HELIX 366 20 372 COLOUR_TEXT_REGION 366 20 372 20 50 HELIX 407 20 408 COLOUR_TEXT_REGION 407 20 408 20 50 HELIX 427 20 429 COLOUR_TEXT_REGION 427 20 429 20 50