SILENT_MODE BLOCK_FILE jp_6K8YOND.concise.blc MAX_NSEQ 872 MAX_INPUT_LEN 874 OUTPUT_FILE jp_6K8YOND.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 88 861 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 862 88 871 H SPACE SUB_CHARS 1 862 88 871 E SPACE SUB_CHARS 1 862 88 871 - SPACE STRAND 20 865 20 COLOUR_TEXT_REGION 20 865 20 865 51 STRAND 55 865 58 COLOUR_TEXT_REGION 55 865 58 865 51 STRAND 64 865 64 COLOUR_TEXT_REGION 64 865 64 865 51 HELIX 3 865 14 COLOUR_TEXT_REGION 3 865 14 865 50 HELIX 23 865 30 COLOUR_TEXT_REGION 23 865 30 865 50 HELIX 36 865 46 COLOUR_TEXT_REGION 36 865 46 865 50 HELIX 71 865 81 COLOUR_TEXT_REGION 71 865 81 865 50 STRAND 20 870 21 COLOUR_TEXT_REGION 20 870 21 870 51 STRAND 55 870 58 COLOUR_TEXT_REGION 55 870 58 870 51 HELIX 3 870 14 COLOUR_TEXT_REGION 3 870 14 870 50 HELIX 23 870 30 COLOUR_TEXT_REGION 23 870 30 870 50 HELIX 36 870 45 COLOUR_TEXT_REGION 36 870 45 870 50 HELIX 71 870 81 COLOUR_TEXT_REGION 71 870 81 870 50 STRAND 56 871 58 COLOUR_TEXT_REGION 56 871 58 871 51 STRAND 63 871 64 COLOUR_TEXT_REGION 63 871 64 871 51 HELIX 3 871 13 COLOUR_TEXT_REGION 3 871 13 871 50 HELIX 23 871 30 COLOUR_TEXT_REGION 23 871 30 871 50 HELIX 36 871 48 COLOUR_TEXT_REGION 36 871 48 871 50 HELIX 71 871 82 COLOUR_TEXT_REGION 71 871 82 871 50