SILENT_MODE BLOCK_FILE jp_uWr_NuO.concise.blc MAX_NSEQ 879 MAX_INPUT_LEN 881 OUTPUT_FILE jp_uWr_NuO.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 166 868 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 869 166 878 H SPACE SUB_CHARS 1 869 166 878 E SPACE SUB_CHARS 1 869 166 878 - SPACE STRAND 19 872 24 COLOUR_TEXT_REGION 19 872 24 872 51 STRAND 47 872 49 COLOUR_TEXT_REGION 47 872 49 872 51 STRAND 69 872 74 COLOUR_TEXT_REGION 69 872 74 872 51 STRAND 119 872 122 COLOUR_TEXT_REGION 119 872 122 872 51 STRAND 140 872 149 COLOUR_TEXT_REGION 140 872 149 872 51 STRAND 153 872 157 COLOUR_TEXT_REGION 153 872 157 872 51 HELIX 3 872 12 COLOUR_TEXT_REGION 3 872 12 872 50 HELIX 32 872 41 COLOUR_TEXT_REGION 32 872 41 872 50 HELIX 52 872 64 COLOUR_TEXT_REGION 52 872 64 872 50 HELIX 95 872 115 COLOUR_TEXT_REGION 95 872 115 872 50 HELIX 125 872 133 COLOUR_TEXT_REGION 125 872 133 872 50 STRAND 19 877 24 COLOUR_TEXT_REGION 19 877 24 877 51 STRAND 47 877 49 COLOUR_TEXT_REGION 47 877 49 877 51 STRAND 69 877 74 COLOUR_TEXT_REGION 69 877 74 877 51 STRAND 119 877 122 COLOUR_TEXT_REGION 119 877 122 877 51 STRAND 140 877 149 COLOUR_TEXT_REGION 140 877 149 877 51 STRAND 154 877 159 COLOUR_TEXT_REGION 154 877 159 877 51 HELIX 3 877 12 COLOUR_TEXT_REGION 3 877 12 877 50 HELIX 32 877 41 COLOUR_TEXT_REGION 32 877 41 877 50 HELIX 52 877 64 COLOUR_TEXT_REGION 52 877 64 877 50 HELIX 97 877 100 COLOUR_TEXT_REGION 97 877 100 877 50 HELIX 107 877 115 COLOUR_TEXT_REGION 107 877 115 877 50 HELIX 125 877 133 COLOUR_TEXT_REGION 125 877 133 877 50 STRAND 18 878 24 COLOUR_TEXT_REGION 18 878 24 878 51 STRAND 46 878 49 COLOUR_TEXT_REGION 46 878 49 878 51 STRAND 69 878 74 COLOUR_TEXT_REGION 69 878 74 878 51 STRAND 119 878 121 COLOUR_TEXT_REGION 119 878 121 878 51 STRAND 139 878 150 COLOUR_TEXT_REGION 139 878 150 878 51 STRAND 153 878 157 COLOUR_TEXT_REGION 153 878 157 878 51 HELIX 3 878 12 COLOUR_TEXT_REGION 3 878 12 878 50 HELIX 33 878 41 COLOUR_TEXT_REGION 33 878 41 878 50 HELIX 52 878 64 COLOUR_TEXT_REGION 52 878 64 878 50 HELIX 94 878 116 COLOUR_TEXT_REGION 94 878 116 878 50 HELIX 126 878 133 COLOUR_TEXT_REGION 126 878 133 878 50