SILENT_MODE BLOCK_FILE jp_B0Gh_gE.concise.blc MAX_NSEQ 463 MAX_INPUT_LEN 465 OUTPUT_FILE jp_B0Gh_gE.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 247 452 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 453 247 462 H SPACE SUB_CHARS 1 453 247 462 E SPACE SUB_CHARS 1 453 247 462 - SPACE STRAND 20 456 26 COLOUR_TEXT_REGION 20 456 26 456 51 STRAND 30 456 35 COLOUR_TEXT_REGION 30 456 35 456 51 STRAND 39 456 44 COLOUR_TEXT_REGION 39 456 44 456 51 STRAND 120 456 125 COLOUR_TEXT_REGION 120 456 125 456 51 STRAND 140 456 144 COLOUR_TEXT_REGION 140 456 144 456 51 STRAND 166 456 170 COLOUR_TEXT_REGION 166 456 170 456 51 STRAND 191 456 196 COLOUR_TEXT_REGION 191 456 196 456 51 STRAND 212 456 218 COLOUR_TEXT_REGION 212 456 218 456 51 STRAND 241 456 246 COLOUR_TEXT_REGION 241 456 246 456 51 HELIX 4 456 14 COLOUR_TEXT_REGION 4 456 14 456 50 HELIX 63 456 70 COLOUR_TEXT_REGION 63 456 70 456 50 HELIX 75 456 92 COLOUR_TEXT_REGION 75 456 92 456 50 HELIX 108 456 113 COLOUR_TEXT_REGION 108 456 113 456 50 HELIX 130 456 135 COLOUR_TEXT_REGION 130 456 135 456 50 HELIX 156 456 161 COLOUR_TEXT_REGION 156 456 161 456 50 HELIX 171 456 175 COLOUR_TEXT_REGION 171 456 175 456 50 HELIX 179 456 185 COLOUR_TEXT_REGION 179 456 185 456 50 HELIX 201 456 207 COLOUR_TEXT_REGION 201 456 207 456 50 HELIX 221 456 230 COLOUR_TEXT_REGION 221 456 230 456 50 STRAND 20 461 26 COLOUR_TEXT_REGION 20 461 26 461 51 STRAND 30 461 35 COLOUR_TEXT_REGION 30 461 35 461 51 STRAND 39 461 44 COLOUR_TEXT_REGION 39 461 44 461 51 STRAND 120 461 125 COLOUR_TEXT_REGION 120 461 125 461 51 STRAND 140 461 144 COLOUR_TEXT_REGION 140 461 144 461 51 STRAND 166 461 170 COLOUR_TEXT_REGION 166 461 170 461 51 STRAND 191 461 196 COLOUR_TEXT_REGION 191 461 196 461 51 STRAND 212 461 218 COLOUR_TEXT_REGION 212 461 218 461 51 STRAND 241 461 246 COLOUR_TEXT_REGION 241 461 246 461 51 HELIX 4 461 15 COLOUR_TEXT_REGION 4 461 15 461 50 HELIX 63 461 70 COLOUR_TEXT_REGION 63 461 70 461 50 HELIX 75 461 94 COLOUR_TEXT_REGION 75 461 94 461 50 HELIX 109 461 113 COLOUR_TEXT_REGION 109 461 113 461 50 HELIX 130 461 135 COLOUR_TEXT_REGION 130 461 135 461 50 HELIX 156 461 161 COLOUR_TEXT_REGION 156 461 161 461 50 HELIX 171 461 176 COLOUR_TEXT_REGION 171 461 176 461 50 HELIX 179 461 185 COLOUR_TEXT_REGION 179 461 185 461 50 HELIX 201 461 206 COLOUR_TEXT_REGION 201 461 206 461 50 HELIX 221 461 230 COLOUR_TEXT_REGION 221 461 230 461 50 STRAND 20 462 26 COLOUR_TEXT_REGION 20 462 26 462 51 STRAND 30 462 35 COLOUR_TEXT_REGION 30 462 35 462 51 STRAND 39 462 44 COLOUR_TEXT_REGION 39 462 44 462 51 STRAND 120 462 125 COLOUR_TEXT_REGION 120 462 125 462 51 STRAND 140 462 144 COLOUR_TEXT_REGION 140 462 144 462 51 STRAND 168 462 168 COLOUR_TEXT_REGION 168 462 168 462 51 STRAND 191 462 195 COLOUR_TEXT_REGION 191 462 195 462 51 STRAND 212 462 218 COLOUR_TEXT_REGION 212 462 218 462 51 STRAND 241 462 246 COLOUR_TEXT_REGION 241 462 246 462 51 HELIX 4 462 13 COLOUR_TEXT_REGION 4 462 13 462 50 HELIX 63 462 70 COLOUR_TEXT_REGION 63 462 70 462 50 HELIX 75 462 89 COLOUR_TEXT_REGION 75 462 89 462 50 HELIX 108 462 112 COLOUR_TEXT_REGION 108 462 112 462 50 HELIX 128 462 135 COLOUR_TEXT_REGION 128 462 135 462 50 HELIX 156 462 162 COLOUR_TEXT_REGION 156 462 162 462 50 HELIX 167 462 167 COLOUR_TEXT_REGION 167 462 167 462 50 HELIX 169 462 174 COLOUR_TEXT_REGION 169 462 174 462 50 HELIX 179 462 185 COLOUR_TEXT_REGION 179 462 185 462 50 HELIX 200 462 208 COLOUR_TEXT_REGION 200 462 208 462 50 HELIX 221 462 231 COLOUR_TEXT_REGION 221 462 231 462 50