SILENT_MODE BLOCK_FILE jp__6ZFOpV.concise.blc MAX_NSEQ 65 MAX_INPUT_LEN 67 OUTPUT_FILE jp__6ZFOpV.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 111 54 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 55 111 64 H SPACE SUB_CHARS 1 55 111 64 E SPACE SUB_CHARS 1 55 111 64 - SPACE HELIX 5 58 39 COLOUR_TEXT_REGION 5 58 39 58 50 HELIX 55 58 72 COLOUR_TEXT_REGION 55 58 72 58 50 HELIX 82 58 109 COLOUR_TEXT_REGION 82 58 109 58 50 HELIX 5 63 39 COLOUR_TEXT_REGION 5 63 39 63 50 HELIX 55 63 72 COLOUR_TEXT_REGION 55 63 72 63 50 HELIX 82 63 100 COLOUR_TEXT_REGION 82 63 100 63 50 HELIX 102 63 109 COLOUR_TEXT_REGION 102 63 109 63 50 HELIX 4 64 38 COLOUR_TEXT_REGION 4 64 38 64 50 HELIX 47 64 47 COLOUR_TEXT_REGION 47 64 47 64 50 HELIX 54 64 72 COLOUR_TEXT_REGION 54 64 72 64 50 HELIX 82 64 109 COLOUR_TEXT_REGION 82 64 109 64 50