SILENT_MODE BLOCK_FILE jp_50yBKY9.concise.blc MAX_NSEQ 496 MAX_INPUT_LEN 498 OUTPUT_FILE jp_50yBKY9.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 190 485 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 486 190 495 H SPACE SUB_CHARS 1 486 190 495 E SPACE SUB_CHARS 1 486 190 495 - SPACE STRAND 6 489 12 COLOUR_TEXT_REGION 6 489 12 489 51 STRAND 19 489 23 COLOUR_TEXT_REGION 19 489 23 489 51 STRAND 62 489 66 COLOUR_TEXT_REGION 62 489 66 489 51 STRAND 97 489 101 COLOUR_TEXT_REGION 97 489 101 489 51 STRAND 105 489 109 COLOUR_TEXT_REGION 105 489 109 489 51 STRAND 113 489 118 COLOUR_TEXT_REGION 113 489 118 489 51 STRAND 142 489 146 COLOUR_TEXT_REGION 142 489 146 489 51 STRAND 167 489 173 COLOUR_TEXT_REGION 167 489 173 489 51 HELIX 28 489 33 COLOUR_TEXT_REGION 28 489 33 489 50 HELIX 35 489 46 COLOUR_TEXT_REGION 35 489 46 489 50 HELIX 76 489 93 COLOUR_TEXT_REGION 76 489 93 489 50 HELIX 127 489 133 COLOUR_TEXT_REGION 127 489 133 489 50 HELIX 154 489 162 COLOUR_TEXT_REGION 154 489 162 489 50 HELIX 177 489 187 COLOUR_TEXT_REGION 177 489 187 489 50 STRAND 5 494 12 COLOUR_TEXT_REGION 5 494 12 494 51 STRAND 19 494 23 COLOUR_TEXT_REGION 19 494 23 494 51 STRAND 63 494 67 COLOUR_TEXT_REGION 63 494 67 494 51 STRAND 97 494 101 COLOUR_TEXT_REGION 97 494 101 494 51 STRAND 105 494 109 COLOUR_TEXT_REGION 105 494 109 494 51 STRAND 113 494 118 COLOUR_TEXT_REGION 113 494 118 494 51 STRAND 142 494 146 COLOUR_TEXT_REGION 142 494 146 494 51 STRAND 167 494 173 COLOUR_TEXT_REGION 167 494 173 494 51 HELIX 31 494 32 COLOUR_TEXT_REGION 31 494 32 494 50 HELIX 35 494 46 COLOUR_TEXT_REGION 35 494 46 494 50 HELIX 76 494 93 COLOUR_TEXT_REGION 76 494 93 494 50 HELIX 127 494 133 COLOUR_TEXT_REGION 127 494 133 494 50 HELIX 154 494 161 COLOUR_TEXT_REGION 154 494 161 494 50 HELIX 177 494 188 COLOUR_TEXT_REGION 177 494 188 494 50 STRAND 7 495 12 COLOUR_TEXT_REGION 7 495 12 495 51 STRAND 18 495 23 COLOUR_TEXT_REGION 18 495 23 495 51 STRAND 62 495 65 COLOUR_TEXT_REGION 62 495 65 495 51 STRAND 97 495 101 COLOUR_TEXT_REGION 97 495 101 495 51 STRAND 105 495 109 COLOUR_TEXT_REGION 105 495 109 495 51 STRAND 113 495 118 COLOUR_TEXT_REGION 113 495 118 495 51 STRAND 142 495 145 COLOUR_TEXT_REGION 142 495 145 495 51 STRAND 167 495 172 COLOUR_TEXT_REGION 167 495 172 495 51 HELIX 25 495 46 COLOUR_TEXT_REGION 25 495 46 495 50 HELIX 76 495 93 COLOUR_TEXT_REGION 76 495 93 495 50 HELIX 127 495 134 COLOUR_TEXT_REGION 127 495 134 495 50 HELIX 154 495 163 COLOUR_TEXT_REGION 154 495 163 495 50 HELIX 177 495 187 COLOUR_TEXT_REGION 177 495 187 495 50