SILENT_MODE BLOCK_FILE jp_9uU9aDD.concise.blc MAX_NSEQ 771 MAX_INPUT_LEN 773 OUTPUT_FILE jp_9uU9aDD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 357 760 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 761 357 770 H SPACE SUB_CHARS 1 761 357 770 E SPACE SUB_CHARS 1 761 357 770 - SPACE STRAND 7 764 9 COLOUR_TEXT_REGION 7 764 9 764 51 STRAND 66 764 69 COLOUR_TEXT_REGION 66 764 69 764 51 STRAND 176 764 178 COLOUR_TEXT_REGION 176 764 178 764 51 STRAND 236 764 238 COLOUR_TEXT_REGION 236 764 238 764 51 STRAND 285 764 291 COLOUR_TEXT_REGION 285 764 291 764 51 STRAND 328 764 328 COLOUR_TEXT_REGION 328 764 328 764 51 STRAND 337 764 340 COLOUR_TEXT_REGION 337 764 340 764 51 STRAND 350 764 352 COLOUR_TEXT_REGION 350 764 352 764 51 HELIX 17 764 30 COLOUR_TEXT_REGION 17 764 30 764 50 HELIX 37 764 46 COLOUR_TEXT_REGION 37 764 46 764 50 HELIX 83 764 95 COLOUR_TEXT_REGION 83 764 95 764 50 HELIX 103 764 116 COLOUR_TEXT_REGION 103 764 116 764 50 HELIX 149 764 157 COLOUR_TEXT_REGION 149 764 157 764 50 HELIX 163 764 169 COLOUR_TEXT_REGION 163 764 169 764 50 HELIX 199 764 207 COLOUR_TEXT_REGION 199 764 207 764 50 HELIX 240 764 246 COLOUR_TEXT_REGION 240 764 246 764 50 HELIX 251 764 259 COLOUR_TEXT_REGION 251 764 259 764 50 HELIX 262 764 277 COLOUR_TEXT_REGION 262 764 277 764 50 STRAND 7 769 10 COLOUR_TEXT_REGION 7 769 10 769 51 STRAND 66 769 69 COLOUR_TEXT_REGION 66 769 69 769 51 STRAND 115 769 116 COLOUR_TEXT_REGION 115 769 116 769 51 STRAND 175 769 179 COLOUR_TEXT_REGION 175 769 179 769 51 STRAND 237 769 238 COLOUR_TEXT_REGION 237 769 238 769 51 STRAND 284 769 291 COLOUR_TEXT_REGION 284 769 291 769 51 STRAND 328 769 329 COLOUR_TEXT_REGION 328 769 329 769 51 STRAND 338 769 341 COLOUR_TEXT_REGION 338 769 341 769 51 STRAND 350 769 353 COLOUR_TEXT_REGION 350 769 353 769 51 HELIX 17 769 30 COLOUR_TEXT_REGION 17 769 30 769 50 HELIX 37 769 45 COLOUR_TEXT_REGION 37 769 45 769 50 HELIX 83 769 95 COLOUR_TEXT_REGION 83 769 95 769 50 HELIX 102 769 114 COLOUR_TEXT_REGION 102 769 114 769 50 HELIX 149 769 157 COLOUR_TEXT_REGION 149 769 157 769 50 HELIX 163 769 170 COLOUR_TEXT_REGION 163 769 170 769 50 HELIX 199 769 207 COLOUR_TEXT_REGION 199 769 207 769 50 HELIX 240 769 246 COLOUR_TEXT_REGION 240 769 246 769 50 HELIX 251 769 259 COLOUR_TEXT_REGION 251 769 259 769 50 HELIX 262 769 277 COLOUR_TEXT_REGION 262 769 277 769 50 STRAND 7 770 8 COLOUR_TEXT_REGION 7 770 8 770 51 STRAND 67 770 68 COLOUR_TEXT_REGION 67 770 68 770 51 STRAND 235 770 237 COLOUR_TEXT_REGION 235 770 237 770 51 STRAND 287 770 287 COLOUR_TEXT_REGION 287 770 287 770 51 STRAND 315 770 315 COLOUR_TEXT_REGION 315 770 315 770 51 STRAND 335 770 340 COLOUR_TEXT_REGION 335 770 340 770 51 STRAND 351 770 351 COLOUR_TEXT_REGION 351 770 351 770 51 HELIX 17 770 29 COLOUR_TEXT_REGION 17 770 29 770 50 HELIX 37 770 47 COLOUR_TEXT_REGION 37 770 47 770 50 HELIX 83 770 95 COLOUR_TEXT_REGION 83 770 95 770 50 HELIX 105 770 116 COLOUR_TEXT_REGION 105 770 116 770 50 HELIX 151 770 155 COLOUR_TEXT_REGION 151 770 155 770 50 HELIX 177 770 177 COLOUR_TEXT_REGION 177 770 177 770 50 HELIX 199 770 207 COLOUR_TEXT_REGION 199 770 207 770 50 HELIX 240 770 246 COLOUR_TEXT_REGION 240 770 246 770 50 HELIX 250 770 259 COLOUR_TEXT_REGION 250 770 259 770 50 HELIX 262 770 277 COLOUR_TEXT_REGION 262 770 277 770 50