SILENT_MODE BLOCK_FILE jp_djFx21n.concise.blc MAX_NSEQ 478 MAX_INPUT_LEN 480 OUTPUT_FILE jp_djFx21n.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 119 467 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 468 119 477 H SPACE SUB_CHARS 1 468 119 477 E SPACE SUB_CHARS 1 468 119 477 - SPACE STRAND 24 471 26 COLOUR_TEXT_REGION 24 471 26 471 51 STRAND 52 471 55 COLOUR_TEXT_REGION 52 471 55 471 51 STRAND 60 471 65 COLOUR_TEXT_REGION 60 471 65 471 51 STRAND 93 471 99 COLOUR_TEXT_REGION 93 471 99 471 51 STRAND 108 471 110 COLOUR_TEXT_REGION 108 471 110 471 51 STRAND 116 471 117 COLOUR_TEXT_REGION 116 471 117 471 51 HELIX 9 471 20 COLOUR_TEXT_REGION 9 471 20 471 50 HELIX 34 471 47 COLOUR_TEXT_REGION 34 471 47 471 50 HELIX 72 471 87 COLOUR_TEXT_REGION 72 471 87 471 50 STRAND 24 476 26 COLOUR_TEXT_REGION 24 476 26 476 51 STRAND 52 476 55 COLOUR_TEXT_REGION 52 476 55 476 51 STRAND 60 476 65 COLOUR_TEXT_REGION 60 476 65 476 51 STRAND 94 476 99 COLOUR_TEXT_REGION 94 476 99 476 51 STRAND 108 476 110 COLOUR_TEXT_REGION 108 476 110 476 51 STRAND 115 476 118 COLOUR_TEXT_REGION 115 476 118 476 51 HELIX 9 476 20 COLOUR_TEXT_REGION 9 476 20 476 50 HELIX 34 476 47 COLOUR_TEXT_REGION 34 476 47 476 50 HELIX 72 476 87 COLOUR_TEXT_REGION 72 476 87 476 50 STRAND 24 477 27 COLOUR_TEXT_REGION 24 477 27 477 51 STRAND 52 477 55 COLOUR_TEXT_REGION 52 477 55 477 51 STRAND 60 477 65 COLOUR_TEXT_REGION 60 477 65 477 51 STRAND 93 477 99 COLOUR_TEXT_REGION 93 477 99 477 51 STRAND 101 477 102 COLOUR_TEXT_REGION 101 477 102 477 51 STRAND 108 477 110 COLOUR_TEXT_REGION 108 477 110 477 51 HELIX 10 477 20 COLOUR_TEXT_REGION 10 477 20 477 50 HELIX 34 477 47 COLOUR_TEXT_REGION 34 477 47 477 50 HELIX 72 477 86 COLOUR_TEXT_REGION 72 477 86 477 50