SILENT_MODE
BLOCK_FILE jp_0YivnP_.concise.blc
MAX_NSEQ 141
MAX_INPUT_LEN 143
OUTPUT_FILE jp_0YivnP_.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 165 130   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 131 165 140 H SPACE
SUB_CHARS 1 131 165 140 E SPACE
SUB_CHARS 1 131 165 140 - SPACE
HELIX 17 134 26
COLOUR_TEXT_REGION 17 134 26 134 50
HELIX 30 134 44
COLOUR_TEXT_REGION 30 134 44 134 50
HELIX 58 134 69
COLOUR_TEXT_REGION 58 134 69 134 50
HELIX 73 134 85
COLOUR_TEXT_REGION 73 134 85 134 50
HELIX 90 134 95
COLOUR_TEXT_REGION 90 134 95 134 50
HELIX 102 134 114
COLOUR_TEXT_REGION 102 134 114 134 50
HELIX 130 134 140
COLOUR_TEXT_REGION 130 134 140 134 50
HELIX 146 134 156
COLOUR_TEXT_REGION 146 134 156 134 50
HELIX 13 139 14
COLOUR_TEXT_REGION 13 139 14 139 50
HELIX 17 139 26
COLOUR_TEXT_REGION 17 139 26 139 50
HELIX 32 139 44
COLOUR_TEXT_REGION 32 139 44 139 50
HELIX 58 139 69
COLOUR_TEXT_REGION 58 139 69 139 50
HELIX 73 139 85
COLOUR_TEXT_REGION 73 139 85 139 50
HELIX 90 139 95
COLOUR_TEXT_REGION 90 139 95 139 50
HELIX 103 139 114
COLOUR_TEXT_REGION 103 139 114 139 50
HELIX 130 139 140
COLOUR_TEXT_REGION 130 139 140 139 50
HELIX 146 139 156
COLOUR_TEXT_REGION 146 139 156 139 50
STRAND 119 140 119
COLOUR_TEXT_REGION 119 140 119 140 51
HELIX 17 140 26
COLOUR_TEXT_REGION 17 140 26 140 50
HELIX 30 140 44
COLOUR_TEXT_REGION 30 140 44 140 50
HELIX 58 140 69
COLOUR_TEXT_REGION 58 140 69 140 50
HELIX 73 140 85
COLOUR_TEXT_REGION 73 140 85 140 50
HELIX 90 140 95
COLOUR_TEXT_REGION 90 140 95 140 50
HELIX 101 140 114
COLOUR_TEXT_REGION 101 140 114 140 50
HELIX 130 140 140
COLOUR_TEXT_REGION 130 140 140 140 50
HELIX 146 140 156
COLOUR_TEXT_REGION 146 140 156 140 50