SILENT_MODE BLOCK_FILE jp_g9AQqZH.concise.blc MAX_NSEQ 975 MAX_INPUT_LEN 977 OUTPUT_FILE jp_g9AQqZH.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 168 964 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 965 168 974 H SPACE SUB_CHARS 1 965 168 974 E SPACE SUB_CHARS 1 965 168 974 - SPACE STRAND 52 968 58 COLOUR_TEXT_REGION 52 968 58 968 51 STRAND 63 968 68 COLOUR_TEXT_REGION 63 968 68 968 51 STRAND 75 968 78 COLOUR_TEXT_REGION 75 968 78 968 51 STRAND 85 968 87 COLOUR_TEXT_REGION 85 968 87 968 51 STRAND 94 968 97 COLOUR_TEXT_REGION 94 968 97 968 51 STRAND 115 968 122 COLOUR_TEXT_REGION 115 968 122 968 51 STRAND 127 968 134 COLOUR_TEXT_REGION 127 968 134 968 51 HELIX 4 968 27 COLOUR_TEXT_REGION 4 968 27 968 50 HELIX 32 968 46 COLOUR_TEXT_REGION 32 968 46 968 50 HELIX 88 968 89 COLOUR_TEXT_REGION 88 968 89 968 50 HELIX 143 968 166 COLOUR_TEXT_REGION 143 968 166 968 50 STRAND 51 973 58 COLOUR_TEXT_REGION 51 973 58 973 51 STRAND 63 973 68 COLOUR_TEXT_REGION 63 973 68 973 51 STRAND 76 973 78 COLOUR_TEXT_REGION 76 973 78 973 51 STRAND 94 973 97 COLOUR_TEXT_REGION 94 973 97 973 51 STRAND 115 973 122 COLOUR_TEXT_REGION 115 973 122 973 51 STRAND 127 973 134 COLOUR_TEXT_REGION 127 973 134 973 51 HELIX 3 973 27 COLOUR_TEXT_REGION 3 973 27 973 50 HELIX 32 973 46 COLOUR_TEXT_REGION 32 973 46 973 50 HELIX 85 973 90 COLOUR_TEXT_REGION 85 973 90 973 50 HELIX 143 973 166 COLOUR_TEXT_REGION 143 973 166 973 50 STRAND 53 974 57 COLOUR_TEXT_REGION 53 974 57 974 51 STRAND 63 974 67 COLOUR_TEXT_REGION 63 974 67 974 51 STRAND 74 974 79 COLOUR_TEXT_REGION 74 974 79 974 51 STRAND 85 974 89 COLOUR_TEXT_REGION 85 974 89 974 51 STRAND 94 974 97 COLOUR_TEXT_REGION 94 974 97 974 51 STRAND 115 974 123 COLOUR_TEXT_REGION 115 974 123 974 51 STRAND 127 974 134 COLOUR_TEXT_REGION 127 974 134 974 51 HELIX 5 974 26 COLOUR_TEXT_REGION 5 974 26 974 50 HELIX 32 974 46 COLOUR_TEXT_REGION 32 974 46 974 50 HELIX 143 974 166 COLOUR_TEXT_REGION 143 974 166 974 50